Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p61940 Brassica napus
Aa31LG8G12870 Aethionema arabicum
Actinidia23267 Actinidia chinensis
Ah.05g168810 Amaranthus hybridus
AL7G18200 Arabidopsis lyrata
Aqoxy5G01260 Aquilegia oxysepala
Aqoxy5G01262 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.GU4KEX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SS1ETW Arachis hypogaea
AT4G33360 Arabidopsis thaliana
ATR0100G004 Amborella trichopoda
Atru.chr13.653 Acer truncatum
AUR62022424 Chenopodium quinoa
AUR62022425 Chenopodium quinoa
AUR62042179 Chenopodium quinoa
BcaNung02168 Brassica carinata
BolC7t46405H Brassica oleracea
BraA03t15233Z Brassica rapa
C07p59600 Brassica napus
CAN.G1422.8 Capsicum annuum
CANSAT11G0880 Cannabis sativa
CARHR160310 Cardamine hirsuta
CARHR241410 Cardamine hirsuta
Carub.0007s0712 Capsella rubella
Ca_15956_v3 Cicer arietinum L.
Cc10_g04290 Coffea canephora
Cfa018529 Carpinus fangiana
Cfa024413 Carpinus fangiana
CiPaw.15G061300 Carya illinoinensis
ClCG05G019760 Citrullus lanatus
COL.COLO4_26480 Corchorus olitorius
Cpa.g.sc49.3 Carica papaya
Cre10.g442200 Chlamydomonas reinhardtii
CsaV3_4G034210 Cucumis sativus L.
CSS0045021 Camellia sinensis var. sinensis
DCAR_019459 Daucus carota
DCAR_019460 Daucus carota
Dinv35971 Davidia involucrata
Duzib116G0543 Durio zibethinus
ECA247G1238 Erigeron canadensis
EL10Ac1g01745 Beta vulgaris
Eucgr.F02362 Eucalyptus grandis
FAN15G0193 Fragaria x ananassa
FAN20G1997 Fragaria x ananassa
FvH4_2g34590 Fragaria vesca
Glyma.06G038700 Glycine max
Gohir.A05G201600 Gossypium hirsutum
Gohir.D05G204700 Gossypium hirsutum
Gorai.009G211000 Gossypium raimondii
GSVIVG01009520001 Vitis vinifera
HanXRQChr02g0037721 Helianthus annuus
Haze_17539 Corylus avellana
Haze_17540 Corylus avellana
Haze_17548 Corylus avellana
Haze_17549 Corylus avellana
Hma1.2p1_0718F.1_g208400 Hydrangea macrophylla
HPP92_005781 Vanilla planifolia
HPP92_005809 Vanilla planifolia
Hund17582 Selenicereus undatus
Lalb_Chr23g0267001 Lupinus albus
Lj1g0004345 Lotus japonicus
Lj1g0008117 Lotus japonicus
Lj4C775G11 Lonicera japonica
Lsat_1_v5_gn_1_20400 Lactuca sativa
Lsat_1_v5_gn_1_20920 Lactuca sativa
Manes.18G032300 Manihot esculenta
Mapoly0011s0141 Marchantia polymorpha
MBI02_g17332_MAGBIO Magnolia biondii
MD08G1103100 Malus domestica
Medtr3g101500 Medicago truncatula
MELO3C016742.2 Cucumis melo
Migut.C00593 Erythranthe guttata
MSTRG.1337 Avicennia marina
MSTRG.23410 Avicennia marina
Nitab4.5_0000453g0190 Nicotiana tabacum
Nitab4.5_0001845g0020 Nicotiana tabacum
Nitab4.5_0004184g0040 Nicotiana tabacum
Nn1g00509 Nelumbo nucifera
Nn1g05825 Nelumbo nucifera
Oeu017165.1 Olea europaea
Oeu043552.1 Olea europaea
Os03g0184550 Oryza sativa ssp. japonica
Os03g0184600 Oryza sativa ssp. japonica
Peaxi162Scf00064g00122 Petunia axillaris
PGR031G0488 Punica granatum
PGSC0003DMG400015444 Solanum tuberosum
Phvul.009G064000 Phaseolus vulgaris
Potri.002G127400 Populus trichocarpa
Potri.002G127500 Populus trichocarpa
Pp3c17_9770 Physcomitrium patens
Prupe.1G438100 Prunus persica
Psat0s3123g0160 Pisum sativum
Psat5g077160 Pisum sativum
PSO170G1058 Papaver somniferum
PSO210G4359 Papaver somniferum
QL02p005341 Quercus lobata
QL02p005347 Quercus lobata
RcHm_v2.0_Chr4g0409851 Rosa chinensis
RcHm_v2.0_Chr5g0013111 Rosa chinensis
RcHm_v2.0_Chr6g0307561 Rosa chinensis
RcHm_v2.0_Chr6g0307711 Rosa chinensis
Rhsim06G0048400 Rhododendron simsii
Sabra02G0099800 Salix brachista
Sabra02G0099900 Salix brachista
SalBow7G2586 Salvia bowleyana
Sc26g0003990 Simmondsia chinensis
Sed0008971 Sechium edule
SEGI_26518 Sequoiadendron giganteum
SGA_v2.0_scaffold208G41993 Striga asiatica
SMO201G0007 Selaginella moellendorffii
Solyc12g088880.2 Solanum lycopersicum
Sopen12g030770 Solanum pennellii
Sp7g31070 Schrenkiella parvula
TAR381G0900 Trochodendron aralioides
Thecc.08G010700 Theobroma cacao
Thhalv10025657m.g Eutrema salsugineum
TPR.G35860 Trifolium pratense
TWI56G0317 Tripterygium wilfordii
unitig_90.g27525 Utricularia gibba
unitig_90.g27526 Utricularia gibba
vmacro21534 Vaccinium macrocarpon
VMungo1309G1770 Vigna mungo
Zm00001eb006380 Zea mays

User provided reference genes

Program Settings