Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p00110 Brassica napus
Aa31LG4G12770 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.808 Anthoceros agrestis
Actinidia21965 Actinidia chinensis
Ah.09g225120 Amaranthus hybridus
AL5G20780 Arabidopsis lyrata
Aqoxy7G03664 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.78GREI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L0MYGA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VL0260 Arachis hypogaea
AT3G33520 Arabidopsis thaliana
ATR0767G250 Amborella trichopoda
Atru.chr7.1116 Acer truncatum
AUR62011163 Chenopodium quinoa
AUR62013322 Chenopodium quinoa
BcaB04g16922 Brassica carinata
BcaB04g16923 Brassica carinata
BolC3t21636H Brassica oleracea
BraA08t32068Z Brassica rapa
C03p93390 Brassica napus
CAN.G560.5 Capsicum annuum
CANSAT11G2412 Cannabis sativa
CARHR153600 Cardamine hirsuta
Carub.0016s0009 Capsella rubella
Ca_02766_v3 Cicer arietinum L.
CBR_g55542 Chara braunii
Cc06_g08200 Coffea canephora
CDE07G0544 Ceratophyllum demersum
Cfa003406 Carpinus fangiana
Ciclev10008344m.g Citrus clementina
CiPaw.03G247000 Carya illinoinensis
ClCG11G003220 Citrullus lanatus
COL.COLO4_35124 Corchorus olitorius
Cpa.g.sc46.24 Carica papaya
Cre08.g382590 Chlamydomonas reinhardtii
CsaV3_2G003040 Cucumis sativus L.
CSS0043826 Camellia sinensis var. sinensis
DCAR_017799 Daucus carota
Dinv36494 Davidia involucrata
ECA234G2265 Erigeron canadensis
EL10Ac8g18700 Beta vulgaris
Eucgr.C04260 Eucalyptus grandis
FAN19G1255 Fragaria x ananassa
FAN23G2413 Fragaria x ananassa
FAN23G3073 Fragaria x ananassa
FAN26G0206 Fragaria x ananassa
FAN28G0768 Fragaria x ananassa
FvH4_1g02800 Fragaria vesca
Glyma.04G071500 Glycine max
Gohir.A06G054400 Gossypium hirsutum
Gohir.A07G036900 Gossypium hirsutum
Gohir.D06G053300 Gossypium hirsutum
Gohir.D07G041100 Gossypium hirsutum
Gorai.001G043500 Gossypium raimondii
Gorai.010G062300 Gossypium raimondii
GSVIVG01015556001 Vitis vinifera
HanXRQChr10g0315711 Helianthus annuus
Haze_25535 Corylus avellana
Haze_25540 Corylus avellana
Hma1.2p1_0279F.1_g112070 Hydrangea macrophylla
HPP92_009856 Vanilla planifolia
Hund09272 Selenicereus undatus
Lalb_Chr08g0234671 Lupinus albus
Lj1g0001128 Lotus japonicus
Lj1g0001923 Lotus japonicus
Lj6g0009868 Lotus japonicus
Lj7A426T66 Lonicera japonica
Lsat_1_v5_gn_5_96421 Lactuca sativa
Manes.06G056200 Manihot esculenta
Mapoly0069s0083 Marchantia polymorpha
MBI04_g29331_MAGBIO Magnolia biondii
MCO16G676 Micromonas commoda
MCO16G677 Micromonas commoda
MD02G1028000 Malus domestica
MD15G1169700 Malus domestica
Medtr2g445210 Medicago truncatula
MELO3C004459.2 Cucumis melo
Migut.J01219 Erythranthe guttata
MSTRG.19615 Avicennia marina
Nitab4.5_0000032g0140 Nicotiana tabacum
Nitab4.5_0001224g0050 Nicotiana tabacum
Nn2g12082 Nelumbo nucifera
Oeu012615.1 Olea europaea
Os01g0269900 Oryza sativa ssp. japonica
Peaxi162Scf00148g00088 Petunia axillaris
Peaxi162Scf00765g00411 Petunia axillaris
PGR102G1368 Punica granatum
PGSC0003DMG400014966 Solanum tuberosum
Phvul.003G068000 Phaseolus vulgaris
Potri.018G128300 Populus trichocarpa
Pp3c8_11640 Physcomitrium patens
PRCOL_00005532 Prasinoderma coloniale
Prupe.7G246800 Prunus persica
Psat1g024400 Pisum sativum
PSO170G4595 Papaver somniferum
PSO782G3791 Papaver somniferum
QL02p089534 Quercus lobata
RcHm_v2.0_Chr2g0087891 Rosa chinensis
Rhsim01G0066700 Rhododendron simsii
Sabra18G0109100 Salix brachista
SalBow6G5422 Salvia bowleyana
Sc18g0000440 Simmondsia chinensis
Sed0025274 Sechium edule
SEGI_24134 Sequoiadendron giganteum
SEGI_39783 Sequoiadendron giganteum
SGA_v2.0_scaffold1819G54044 Striga asiatica
SGA_v2.0_scaffold229G43307 Striga asiatica
SHI28857 Sapria himalayana
SMO228G0125 Selaginella moellendorffii
Solyc05g018600.3 Solanum lycopersicum
Sopen05g015760 Solanum pennellii
Sp1g41720 Schrenkiella parvula
TAR636G3437 Trochodendron aralioides
THA.LOC104815099 Tarenaya hassleriana
Thecc.09G129900 Theobroma cacao
Thhalv10011531m.g Eutrema salsugineum
TPR.G9552 Trifolium pratense
TWI32G0173 Tripterygium wilfordii
unitig_60.g25514 Utricularia gibba
vmacro20579 Vaccinium macrocarpon
VMungo0251G0991 Vigna mungo
Zm00001eb411820 Zea mays
Zm00001eb411830 Zea mays

User provided reference genes

Program Settings