Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p33990 Brassica napus
Aa31LG8G2650 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.1464 Anthoceros agrestis
Actinidia05212 Actinidia chinensis
AL230U10010 Arabidopsis lyrata
AL3G27960 Arabidopsis lyrata
Aqoxy4G01032 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.BQ9KJC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LU5I8Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q2B5NH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XCJ8AH Arachis hypogaea
AT3G15410 Arabidopsis thaliana
ATR0680G100 Amborella trichopoda
Atru.chr2.2718 Acer truncatum
AUR62029364 Chenopodium quinoa
AUR62034280 Chenopodium quinoa
BcaB06g29573 Brassica carinata
BcaC05g29008 Brassica carinata
BolC5t33860H Brassica oleracea
BraA05t22221Z Brassica rapa
C05p51740 Brassica napus
C07p42570 Brassica napus
CAN.G1110.52 Capsicum annuum
CANSAT56G4311 Cannabis sativa
CARHR090460 Cardamine hirsuta
Carub.0003s1514 Capsella rubella
CBR_g29878 Chara braunii
Cc05_g12250 Coffea canephora
Cc05_g12270 Coffea canephora
Cc05_g12290 Coffea canephora
Cc05_g12300 Coffea canephora
CDE05G0932 Ceratophyllum demersum
Cfa020552 Carpinus fangiana
Ciclev10007835m.g Citrus clementina
CiPaw.11G172800 Carya illinoinensis
ClCG10G006830 Citrullus lanatus
COL.COLO4_09426 Corchorus olitorius
Cpa.g.sc80.40 Carica papaya
Cre01.g054100 Chlamydomonas reinhardtii
CsaV3_3G006190 Cucumis sativus L.
CSS0010017 Camellia sinensis var. sinensis
DCAR_017149 Daucus carota
Dinv08311 Davidia involucrata
Duzib213G0302 Durio zibethinus
ECA240G2314 Erigeron canadensis
EL10Ac4g08136 Beta vulgaris
Eucgr.F03334 Eucalyptus grandis
FAN11G1997 Fragaria x ananassa
FAN16G3027 Fragaria x ananassa
FAN25G1684 Fragaria x ananassa
FvH4_3g20490 Fragaria vesca
Glyma.12G222700 Glycine max
Glyma.13G278800 Glycine max
Gohir.1Z049312 Gossypium hirsutum
Gohir.A13G145200 Gossypium hirsutum
Gohir.D13G150000 Gossypium hirsutum
Gorai.013G167800 Gossypium raimondii
GSVIVG01014371001 Vitis vinifera
HanXRQChr01g0008901 Helianthus annuus
HanXRQChr03g0078511 Helianthus annuus
HanXRQChr09g0260971 Helianthus annuus
Haze_09464 Corylus avellana
Haze_09468 Corylus avellana
Hma1.2p1_0148F.1_g066160 Hydrangea macrophylla
Hma1.2p1_0148F.1_g066170 Hydrangea macrophylla
HPP92_022050 Vanilla planifolia
HPP92_027622 Vanilla planifolia
Hund22942 Selenicereus undatus
Lalb_Chr20g0109761 Lupinus albus
Lj1A847G19 Lonicera japonica
Lj3g0017554 Lotus japonicus
Lsat_1_v5_gn_9_85500 Lactuca sativa
Lsat_1_v5_gn_9_97140 Lactuca sativa
Manes.03G112900 Manihot esculenta
Mapoly0029s0091 Marchantia polymorpha
MBI17_g46353_MAGBIO Magnolia biondii
MCO03G083 Micromonas commoda
MD00G1090000 Malus domestica
MD11G1243500 Malus domestica
MD11G1243700 Malus domestica
Medtr2g079560 Medicago truncatula
MELO3C016523.2 Cucumis melo
Migut.H01927 Erythranthe guttata
MSTRG.14365 Avicennia marina
Nitab4.5_0000207g0180 Nicotiana tabacum
Nitab4.5_0001320g0170 Nicotiana tabacum
Nitab4.5_0001320g0180 Nicotiana tabacum
Nn1g06599 Nelumbo nucifera
Oeu008016.1 Olea europaea
Os02g0826600 Oryza sativa ssp. japonica
Peaxi162Scf00027g02813 Petunia axillaris
PGR031G1387 Punica granatum
Phvul.005G083000 Phaseolus vulgaris
Potri.011G121700 Populus trichocarpa
Pp3c6_15930 Physcomitrium patens
PRCOL_00002721 Prasinoderma coloniale
Prupe.4G184800 Prunus persica
Psat5g245040 Pisum sativum
PSO210G4054 Papaver somniferum
PSO832G1845 Papaver somniferum
RcHm_v2.0_Chr5g0034391 Rosa chinensis
Rhsim06G0196800 Rhododendron simsii
Sabra11G0105600 Salix brachista
Sabra11G0105900 Salix brachista
Sabra11G0106700 Salix brachista
Sabra11G0107000 Salix brachista
Sabra11G0107700 Salix brachista
SalBow7G3592 Salvia bowleyana
Sc13g0008670 Simmondsia chinensis
Sc16g0006920 Simmondsia chinensis
Sed0021838 Sechium edule
SGA_v2.0_scaffold9G04934 Striga asiatica
SMO200G0168 Selaginella moellendorffii
Solyc10g006930.4 Solanum lycopersicum
Sopen10g002840 Solanum pennellii
Sp3g13670 Schrenkiella parvula
TAR626G0245 Trochodendron aralioides
THA.LOC104810484 Tarenaya hassleriana
Thecc.07G078400 Theobroma cacao
Thecc.07G078700 Theobroma cacao
Thecc.07G079000 Theobroma cacao
Thhalv10020366m.g Eutrema salsugineum
TPR.G38952 Trifolium pratense
TWI38G2391 Tripterygium wilfordii
unitig_26.g9535 Utricularia gibba
vmacro07967 Vaccinium macrocarpon
vmacro11856 Vaccinium macrocarpon
VMungo1080G0525 Vigna mungo
Zm00001eb259320 Zea mays

User provided reference genes

Program Settings