Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p01860 Brassica napus
Aa31LG3G1430 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_340.278 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.3199 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.3200 Anthoceros agrestis
Actinidia39632 Actinidia chinensis
AL4G38570 Arabidopsis lyrata
Aqoxy7G00994 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.01BVTU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.0RA7LN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.79CBXL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.AL0C1A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FN1ZD1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SDP06M Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U142NQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X5C3W6 Arachis hypogaea
AT2G40700 Arabidopsis thaliana
ATR0681G191 Amborella trichopoda
Atru.BG.251.p Acer truncatum
AUR62025281 Chenopodium quinoa
AUR62028284 Chenopodium quinoa
BcaC02g12729 Brassica carinata
BolC4t21864H Brassica oleracea
BraA05t19184Z Brassica rapa
C04p02160 Brassica napus
CAN.G63.3 Capsicum annuum
CANSAT56G3053 Cannabis sativa
CARHR135800 Cardamine hirsuta
Carub.0004s2299 Capsella rubella
Ca_02238_v3 Cicer arietinum L.
CBR_g25740 Chara braunii
Cc06_g12550 Coffea canephora
CDE05G3042 Ceratophyllum demersum
Cfa002956 Carpinus fangiana
Cfa025605 Carpinus fangiana
Ciclev10031043m.g Citrus clementina
Ciclev10032266m.g Citrus clementina
CiPaw.03G202900 Carya illinoinensis
ClCG11G001320 Citrullus lanatus
COL.COLO4_10035 Corchorus olitorius
Cpa.g.sc19.50 Carica papaya
Cre03.g188550 Chlamydomonas reinhardtii
CsaV3_2G001060 Cucumis sativus L.
CSS0001786 Camellia sinensis var. sinensis
CSS0019573 Camellia sinensis var. sinensis
CSS0040690 Camellia sinensis var. sinensis
DCAR_011929 Daucus carota
Dinv25527 Davidia involucrata
ECA240G3904 Erigeron canadensis
EL10Ac8g19014 Beta vulgaris
Eucgr.C03292 Eucalyptus grandis
FAN19G2326 Fragaria x ananassa
FAN23G0040 Fragaria x ananassa
FAN26G0820 Fragaria x ananassa
FAN26G2748 Fragaria x ananassa
FAN26G3402 Fragaria x ananassa
FAN28G1070 Fragaria x ananassa
FAN28G1423 Fragaria x ananassa
FvH4_1g09140 Fragaria vesca
Glyma.09G072400 Glycine max
Glyma.15G181200 Glycine max
Glyma.15G181250 Glycine max
Gohir.A05G402500 Gossypium hirsutum
Gohir.D04G013000 Gossypium hirsutum
Gohir.D04G013066 Gossypium hirsutum
Gorai.012G015300 Gossypium raimondii
GSVIVG01015034001 Vitis vinifera
HanXRQChr03g0060061 Helianthus annuus
Haze_26046 Corylus avellana
HPP92_015509 Vanilla planifolia
Hund26071 Selenicereus undatus
Lalb_Chr11g0074071 Lupinus albus
Lj6g0009643 Lotus japonicus
Lj7A690G50 Lonicera japonica
Lsat_1_v5_gn_7_35321 Lactuca sativa
Manes.17G108000 Manihot esculenta
Mapoly0167s0009 Marchantia polymorpha
MBI19_g29885_MAGBIO Magnolia biondii
MCO02G169 Micromonas commoda
MD02G1096800 Malus domestica
MD15G1221600 Malus domestica
Medtr2g043360 Medicago truncatula
Medtr4g059460 Medicago truncatula
Medtr4g459350 Medicago truncatula
MELO3C004663.2 Cucumis melo
Migut.J00898 Erythranthe guttata
Migut.J00899 Erythranthe guttata
MSTRG.19437 Avicennia marina
Nitab4.5_0001565g0050 Nicotiana tabacum
Nitab4.5_0009109g0050 Nicotiana tabacum
Nn8g38561 Nelumbo nucifera
Nn8g38562 Nelumbo nucifera
Oeu038755.1 Olea europaea
Os05g0110500 Oryza sativa ssp. japonica
Peaxi162Scf00547g00710 Petunia axillaris
PGR044G1223 Punica granatum
PGSC0003DMG401002393 Solanum tuberosum
PGSC0003DMG402002393 Solanum tuberosum
Phvul.009G224700 Phaseolus vulgaris
Potri.019G059100 Populus trichocarpa
Pp3c17_13450 Physcomitrium patens
PRCOL_00004347 Prasinoderma coloniale
Prupe.7G194100 Prunus persica
Psat1g135560 Pisum sativum
PSO017G5181 Papaver somniferum
PSO104G0105 Papaver somniferum
PSO421G0490 Papaver somniferum
PSO478G1396 Papaver somniferum
QL11p001610 Quercus lobata
RcHm_v2.0_Chr2g0095531 Rosa chinensis
Rhsim05G0004000 Rhododendron simsii
Sabra19G0074200 Salix brachista
SalBow6G6568 Salvia bowleyana
Sc14g0000510 Simmondsia chinensis
Sed0023041 Sechium edule
SEGI_41591 Sequoiadendron giganteum
SGA_v2.0_scaffold281G46885 Striga asiatica
SMO356G0388 Selaginella moellendorffii
Solyc07g042270.4 Solanum lycopersicum
Sopen07g021900 Solanum pennellii
Sp4g23020 Schrenkiella parvula
TAR624G0111 Trochodendron aralioides
THA.LOC104824366 Tarenaya hassleriana
Thecc.10G177300 Theobroma cacao
Thhalv10016399m.g Eutrema salsugineum
TPR.G20645 Trifolium pratense
TWI73G1152 Tripterygium wilfordii
unitig_8.g4278 Utricularia gibba
vmacro17100 Vaccinium macrocarpon
VMungo1309G2859 Vigna mungo
Zm00001eb348990 Zea mays

User provided reference genes

Program Settings