Gene: Cc06_g12550

General Information

Structural Information

  • Species Coffea canephora
  • Gene Identifier Cc06_g12550
  • Transcript Identifier Cc06_g12550.1
  • Gene Type Coding gene
  • Location chr6 : 10189376-10195013 : negative

Gene Family Information

  • ID HOM05D000032
  • #Genes/#Species 5307/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • UniProtKB Q9H8H2
  • UniProtKB B9IQ65
  • UniProtKB Q0DLB9
  • UniProtKB F6HGM8
  • UniProtKB B9SLR6
  • UniProtKB Q7XJN0
  • id GSCOCG00041524001

Descriptions

  • Description DEAD-box ATP-dependent RNA helicase 17
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016070
ISO
PLAZA Integrative OrthologyRNA metabolic process Solyc07g042270.4
GO:0009651
ISO
PLAZA Integrative Orthologyresponse to salt stress AT2G40700

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0005524
IEA
InterProATP binding
GO:0003724
ISO
PLAZA Integrative OrthologyRNA helicase activity Solyc07g042270.4

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT2G40700

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR014001 Helicase superfamily 1/2, ATP-binding domain
IPR025313 Domain of unknown function DUF4217
IPR001650 Helicase, C-terminal
IPR011545 DEAD/DEAH box helicase domain
Mapman id Description
35.1 not assigned.annotated