Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p41210 Brassica napus
Aa31LG5G17540 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3967 Anthoceros agrestis
Actinidia29360 Actinidia chinensis
Ah.13g073080 Amaranthus hybridus
AL3G18160 Arabidopsis lyrata
Aqoxy5G03969 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.B9PCCI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CRY945 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H15IA8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RWH2RP Arachis hypogaea
AT3G06980 Arabidopsis thaliana
ATR0796G242 Amborella trichopoda
Atru.BG.98.p Acer truncatum
Atru.chr4.3196 Acer truncatum
AUR62002520 Chenopodium quinoa
AUR62023674 Chenopodium quinoa
BcaC05g29763 Brassica carinata
BcaC05g29829 Brassica carinata
BcaC08g47358 Brassica carinata
BolC5t34688H Brassica oleracea
BolC5t34698H Brassica oleracea
BolC6t39973H Brassica oleracea
BraA05t22844Z Brassica rapa
C05p60420 Brassica napus
C06p49390 Brassica napus
CAN.G1309.2 Capsicum annuum
CAN.G1354.6 Capsicum annuum
CAN.G31.10 Capsicum annuum
CANSAT01G2427 Cannabis sativa
CARHR081590 Cardamine hirsuta
Carub.0003s0650 Capsella rubella
Ca_15290_v3 Cicer arietinum L.
CBR_g39730 Chara braunii
Cc04_g12290 Coffea canephora
CDE12G0126 Ceratophyllum demersum
Cfa010333 Carpinus fangiana
Ciclev10019165m.g Citrus clementina
CiPaw.14G043800 Carya illinoinensis
ClCG05G006990 Citrullus lanatus
COL.COLO4_25110 Corchorus olitorius
Cpa.g.sc146.4 Carica papaya
Cre10.g436650 Chlamydomonas reinhardtii
CsaV3_3G015680 Cucumis sativus L.
CSS0009259 Camellia sinensis var. sinensis
CSS0031989 Camellia sinensis var. sinensis
CSS0045821 Camellia sinensis var. sinensis
DCAR_026922 Daucus carota
Dinv29492 Davidia involucrata
Duzib116G0019 Durio zibethinus
ECA236G4337 Erigeron canadensis
EL10Ac3g06215 Beta vulgaris
EL10Ac3g06216 Beta vulgaris
Eucgr.B02191 Eucalyptus grandis
Eucgr.B02194 Eucalyptus grandis
Eucgr.L01074 Eucalyptus grandis
Eucgr.L01946 Eucalyptus grandis
FAN07G2341 Fragaria x ananassa
FAN12G2293 Fragaria x ananassa
FAN17G1552 Fragaria x ananassa
FvH4_4g21860 Fragaria vesca
Glyma.04G002600 Glycine max
Glyma.06G002600 Glycine max
Gohir.A02G083900 Gossypium hirsutum
Gohir.D02G104400 Gossypium hirsutum
Gorai.005G118500 Gossypium raimondii
Gorai.005G118600 Gossypium raimondii
GSVIVG01017719001 Vitis vinifera
HanXRQChr12g0357911 Helianthus annuus
Haze_03303 Corylus avellana
Hma1.2p1_0050F.1_g029160 Hydrangea macrophylla
Hma1.2p1_0050F.1_g029180 Hydrangea macrophylla
Hma1.2p1_0050F.1_g029190 Hydrangea macrophylla
HPP92_010024 Vanilla planifolia
HPP92_015296 Vanilla planifolia
Hund22662 Selenicereus undatus
Lalb_Chr23g0264971 Lupinus albus
Lj1g0014517 Lotus japonicus
Lj3A842G68 Lonicera japonica
Lsat_1_v5_gn_8_109040 Lactuca sativa
Manes.13G083900 Manihot esculenta
Mapoly0008s0120 Marchantia polymorpha
MBI18_g03874_MAGBIO Magnolia biondii
MCO15G117 Micromonas commoda
MD13G1136200 Malus domestica
MD16G1131600 Malus domestica
Medtr3g118120 Medicago truncatula
MELO3C006765.2 Cucumis melo
Migut.H01047 Erythranthe guttata
MSTRG.14194 Avicennia marina
Nitab4.5_0000100g0030 Nicotiana tabacum
Nitab4.5_0000100g0040 Nicotiana tabacum
Nitab4.5_0000607g0070 Nicotiana tabacum
Nitab4.5_0000607g0080 Nicotiana tabacum
Nn4g25241 Nelumbo nucifera
Oeu041288.2 Olea europaea
Os03g0108600 Oryza sativa ssp. japonica
Peaxi162Scf00126g00525 Petunia axillaris
Peaxi162Scf00126g00526 Petunia axillaris
PGR031G1822 Punica granatum
Phvul.009G118200 Phaseolus vulgaris
Potri.010G004700 Populus trichocarpa
Pp3c13_12980 Physcomitrium patens
Pp3c13_13090 Physcomitrium patens
Prupe.1G209200 Prunus persica
Psat5g001760 Pisum sativum
PSO063G4518 Papaver somniferum
PSO782G0571 Papaver somniferum
QL09p046662 Quercus lobata
RcHm_v2.0_Chr4g0410871 Rosa chinensis
RcHm_v2.0_Chr4g0428121 Rosa chinensis
Rhsim02G0173200 Rhododendron simsii
Sabra10G0004100 Salix brachista
Sc25g0001800 Simmondsia chinensis
Sed0021297 Sechium edule
SGA_v2.0_scaffold109G31096 Striga asiatica
SMO353G0087 Selaginella moellendorffii
SMO364G0895 Selaginella moellendorffii
Solyc11g045180.3 Solanum lycopersicum
Sopen11g020630 Solanum pennellii
Sp3g05940 Schrenkiella parvula
TAR636G3150 Trochodendron aralioides
THA.LOC104827347 Tarenaya hassleriana
Thecc.08G167400 Theobroma cacao
Thhalv10020145m.g Eutrema salsugineum
Thhalv10023968m.g Eutrema salsugineum
TPR.G38557 Trifolium pratense
TWI09G0253 Tripterygium wilfordii
vmacro11034 Vaccinium macrocarpon
VMungo1309G1941 Vigna mungo
Zm00001eb404280 Zea mays

User provided reference genes

Program Settings