Gene: Os03g0108600

General Information

Structural Information

  • Species Oryza sativa ssp. japonica
  • Gene Identifier Os03g0108600
  • Transcript Identifier Os03t0108600-01
  • Gene Type Coding gene
  • Location chr03 : 505960-508859 : positive

Gene Family Information

  • ID HOM05D000032
  • #Genes/#Species 5307/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Os03t0108600-01
  • MSU-ID LOC_Os03g01830.1
  • symbol TCD33
  • symbol OsBIRH1
  • name thermo-sensitive chlorophyll-deficient
  • name BTH-induced RNA helicase 1
  • uniprot Q0DVX2

Descriptions

  • Description DEAD-box RNA helicase, Early chloroplast development under cold stress, Cold tolerance, Defence responses against biotic and abiotic stresses
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0071395
IEP
GOA Databasecellular response to jasmonic acid stimulus
GO:0006968
IDA
GOA Databasecellular defense response
GO:0050832
IDA
GOA Databasedefense response to fungus
GO:0071446
IEP
GOA Databasecellular response to salicylic acid stimulus
GO:0071369
IEP
GOA Databasecellular response to ethylene stimulus
GO:0006952
IEA
GOA Databasedefense response

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0003729
IEA
GOA DatabasemRNA binding
GO:0003724
IDA
IEA
GOA DatabaseRNA helicase activity
GO:0004386
IEA
GOA Databasehelicase activity
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0003723
IEA
GOA DatabaseRNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
IEA
GOA Databasechloroplast

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR014001 Helicase superfamily 1/2, ATP-binding domain
IPR001650 Helicase, C-terminal
IPR011545 DEAD/DEAH box helicase domain
IPR027417 P-loop containing nucleoside triphosphate hydrolase
Mapman id Description
35.1 not assigned.annotated