Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p29640 Brassica napus
A03p36350 Brassica napus
A03p36380 Brassica napus
Aa31LG5G18810 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.2825 Anthoceros agrestis
Actinidia11539 Actinidia chinensis
Actinidia26603 Actinidia chinensis
AL3G19830 Arabidopsis lyrata
Aqoxy2G00762 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2FTV5P Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q3Q3XE Arachis hypogaea
AT3G08840 Arabidopsis thaliana
ATR0681G081 Amborella trichopoda
Atru.chr8.2358 Acer truncatum
AUR62006318 Chenopodium quinoa
AUR62026359 Chenopodium quinoa
BcaB04g18571 Brassica carinata
BcaB04g20289 Brassica carinata
BcaC01g04196 Brassica carinata
BcaC09g49362 Brassica carinata
BolC1t03711H Brassica oleracea
BolC1t03712H Brassica oleracea
BolC3t16668H Brassica oleracea
BraA01t03093Z Brassica rapa
BraA03t12806Z Brassica rapa
C01p37440 Brassica napus
C03p43970 Brassica napus
CAN.G1288.7 Capsicum annuum
CAN.G738.1 Capsicum annuum
CANSAT35G1655 Cannabis sativa
CARHR083150 Cardamine hirsuta
Carub.0003s0795 Capsella rubella
Ca_26097_v3 Cicer arietinum L.
CBR_g38233 Chara braunii
CBR_g45569 Chara braunii
Cc06_g00650 Coffea canephora
Cfa017090 Carpinus fangiana
Ciclev10011082m.g Citrus clementina
CiPaw.09G216900 Carya illinoinensis
ClCG10G022550 Citrullus lanatus
COL.COLO4_03233 Corchorus olitorius
COL.COLO4_14429 Corchorus olitorius
Cpa.g.c34215 Carica papaya
Cre15.g635650 Chlamydomonas reinhardtii
CsaV3_3G033280 Cucumis sativus L.
CSS0019926 Camellia sinensis var. sinensis
CSS0029745 Camellia sinensis var. sinensis
DCAR_028898 Daucus carota
Dinv35431 Davidia involucrata
ECA236G3210 Erigeron canadensis
Eucgr.A00643 Eucalyptus grandis
FAN02G1083 Fragaria x ananassa
FAN05G0609 Fragaria x ananassa
FAN05G5239 Fragaria x ananassa
FAN09G0048 Fragaria x ananassa
FAN14G5183 Fragaria x ananassa
FAN14G5591 Fragaria x ananassa
FvH4_6g10330 Fragaria vesca
Glyma.09G279500 Glycine max
Glyma.16G116800 Glycine max
Glyma.18G209600 Glycine max
Gohir.A04G096200 Gossypium hirsutum
Gohir.D04G136000 Gossypium hirsutum
Gorai.012G119800 Gossypium raimondii
GSVIVG01030240001 Vitis vinifera
HanXRQChr12g0363731 Helianthus annuus
HanXRQChr16g0509701 Helianthus annuus
Haze_21109 Corylus avellana
Hma1.2p1_2300F.1_g319233 Hydrangea macrophylla
Hma1.2p1_2300F.1_g319236 Hydrangea macrophylla
Hma1.2p1_2300F.1_g319240 Hydrangea macrophylla
Hma1.2p1_3169F.1_g333550 Hydrangea macrophylla
HPP92_013852 Vanilla planifolia
HPP92_013866 Vanilla planifolia
Hund03771 Selenicereus undatus
Lalb_Chr01g0023511 Lupinus albus
Lj1g0024727 Lotus japonicus
Lj2A64G51 Lonicera japonica
Lsat_1_v5_gn_8_105740 Lactuca sativa
Manes.09G113900 Manihot esculenta
Mapoly0266s0003 Marchantia polymorpha
MBI15_g25466_MAGBIO Magnolia biondii
MBI15_g29355_MAGBIO Magnolia biondii
MBI15_g29358_MAGBIO Magnolia biondii
MD04G1168900 Malus domestica
MD12G1182400 Malus domestica
Medtr7g071990 Medicago truncatula
MELO3C009120.2 Cucumis melo
Migut.J00081 Erythranthe guttata
MSTRG.5530 Avicennia marina
Nitab4.5_0001703g0070 Nicotiana tabacum
Nitab4.5_0004057g0040 Nicotiana tabacum
Nn2g11051 Nelumbo nucifera
Nn2g16051 Nelumbo nucifera
Oeu023744.1 Olea europaea
Oeu033807.1 Olea europaea
Os07g0691200 Oryza sativa ssp. japonica
Peaxi162Scf00009g01010 Petunia axillaris
Peaxi162Scf00009g01011 Petunia axillaris
PGSC0003DMG400011105 Solanum tuberosum
Phvul.008G089700 Phaseolus vulgaris
Potri.006G106000 Populus trichocarpa
Pp3c18_18940 Physcomitrium patens
PRCOL_00001217 Prasinoderma coloniale
Prupe.6G287100 Prunus persica
Psat3g120600 Pisum sativum
PSO339G6300 Papaver somniferum
QL06p031927 Quercus lobata
QL07p033519 Quercus lobata
RcHm_v2.0_Chr3g0461101 Rosa chinensis
Rhsim05G0227300 Rhododendron simsii
Sabra06G0082600 Salix brachista
SalBow5G4224 Salvia bowleyana
Sc02g0000680 Simmondsia chinensis
Sed0010587 Sechium edule
SEGI_19702 Sequoiadendron giganteum
SEGI_37805 Sequoiadendron giganteum
SMO228G0083 Selaginella moellendorffii
Solyc07g032788.1 Solanum lycopersicum
Solyc09g015130.4 Solanum lycopersicum
Solyc09g031528.1 Solanum lycopersicum
Solyc10g085400.3 Solanum lycopersicum
Sopen10g034850 Solanum pennellii
TAR623G1464 Trochodendron aralioides
THA.LOC104823308 Tarenaya hassleriana
Thecc.05G004100 Theobroma cacao
Thhalv10020004m.g Eutrema salsugineum
TPR.G18656 Trifolium pratense
TPR.G7700 Trifolium pratense
TWI77G0262 Tripterygium wilfordii
vmacro20337 Vaccinium macrocarpon
VMungo1383G2905 Vigna mungo
Zm00001eb111890 Zea mays

User provided reference genes

Program Settings