Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p01110 Brassica napus
A10p26150 Brassica napus
Aa31LG3G15570 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.5588 Anthoceros agrestis
Actinidia14678 Actinidia chinensis
Ah.02g111320 Amaranthus hybridus
Ah.10g034990 Amaranthus hybridus
AL6G22330 Arabidopsis lyrata
Aqoxy7G01465 Aquilegia oxysepala
AT5G11620 Arabidopsis thaliana
ATR0561G048 Amborella trichopoda
Atru.chr7.2083 Acer truncatum
AUR62009271 Chenopodium quinoa
AUR62011965 Chenopodium quinoa
AUR62039710 Chenopodium quinoa
BcaB08g37038 Brassica carinata
BcaC04g19210 Brassica carinata
BcaNung01940 Brassica carinata
BolC2t06477H Brassica oleracea
BolC9t59349H Brassica oleracea
BraA10t44674Z Brassica rapa
C02p05290 Brassica napus
C09p65200 Brassica napus
CANSAT25G1052 Cannabis sativa
CARHR201600 Cardamine hirsuta
Carub.0006s1010 Capsella rubella
Ca_15588_v3 Cicer arietinum L.
Cc08_g09670 Coffea canephora
CDE05G1550 Ceratophyllum demersum
Cfa013369 Carpinus fangiana
Ciclev10009275m.g Citrus clementina
CiPaw.07G203800 Carya illinoinensis
CiPaw.08G026000 Carya illinoinensis
COL.COLO4_20974 Corchorus olitorius
Cpa.g.sc78.4 Carica papaya
Cre09.g393550 Chlamydomonas reinhardtii
CSS0001771 Camellia sinensis var. sinensis
DCAR_003123 Daucus carota
Duzib168G0738 Durio zibethinus
ECA233G3370 Erigeron canadensis
ECA246G4186 Erigeron canadensis
EL10Ac2g04010 Beta vulgaris
EL10Ac2g04013 Beta vulgaris
EL10Ac5g10487 Beta vulgaris
Eucgr.C00599 Eucalyptus grandis
FAN15G0753 Fragaria x ananassa
FAN20G0862 Fragaria x ananassa
FAN27G2199 Fragaria x ananassa
FvH4_2g35480 Fragaria vesca
Glyma.04G084500 Glycine max
Glyma.06G086100 Glycine max
Gohir.A06G092600 Gossypium hirsutum
Gohir.D06G092200 Gossypium hirsutum
Gorai.010G106200 Gossypium raimondii
HanXRQChr02g0050591 Helianthus annuus
HanXRQChr08g0234421 Helianthus annuus
HanXRQChr13g0402041 Helianthus annuus
Haze_21893 Corylus avellana
Hma1.2p1_0049F.1_g028530 Hydrangea macrophylla
HPP92_024066 Vanilla planifolia
Lalb_Chr11g0064511 Lupinus albus
Lj1g0013558 Lotus japonicus
Lsat_1_v5_gn_5_33661 Lactuca sativa
Manes.16G075200 Manihot esculenta
Mapoly0068s0072 Marchantia polymorpha
MBI01_g42891_MAGBIO Magnolia biondii
MCO02G382 Micromonas commoda
MD08G1113400 Malus domestica
MD15G1092800 Malus domestica
Medtr3g109690 Medicago truncatula
MELO3C011137.2 Cucumis melo
Migut.A00199 Erythranthe guttata
MSTRG.11696 Avicennia marina
Nitab4.5_0000664g0190 Nicotiana tabacum
Nitab4.5_0001515g0030 Nicotiana tabacum
Nitab4.5_0001567g0220 Nicotiana tabacum
Nitab4.5_0003794g0090 Nicotiana tabacum
Nn8g39119 Nelumbo nucifera
Oeu030719.1 Olea europaea
Oeu031102.1 Olea europaea
Os06g0554100 Oryza sativa ssp. japonica
Peaxi162Scf00227g00915 Petunia axillaris
Peaxi162Scf00247g00005 Petunia axillaris
PGR031G3052 Punica granatum
PGSC0003DMG400002225 Solanum tuberosum
PGSC0003DMG400018561 Solanum tuberosum
Phvul.009G110100 Phaseolus vulgaris
Potri.006G238000 Populus trichocarpa
Pp3c11_3140 Physcomitrium patens
Prupe.1G447700 Prunus persica
Psat5g021160 Pisum sativum
PSO173G0044 Papaver somniferum
PSO173G0086 Papaver somniferum
PSO173G0103 Papaver somniferum
PSO507G0019 Papaver somniferum
PSO824G0019 Papaver somniferum
PSO824G0035 Papaver somniferum
PSO832G3272 Papaver somniferum
PSO832G4257 Papaver somniferum
QL12p041319 Quercus lobata
RcHm_v2.0_Chr6g0306281 Rosa chinensis
RcHm_v2.0_Chr6g0306291 Rosa chinensis
RcHm_v2.0_Chr6g0306391 Rosa chinensis
RcHm_v2.0_Chr6g0306401 Rosa chinensis
Rhsim07G0147000 Rhododendron simsii
Sabra06G0186300 Salix brachista
SalBow4G1457 Salvia bowleyana
Sc09g0009310 Simmondsia chinensis
Sc09g0009320 Simmondsia chinensis
Sed0020456 Sechium edule
Sed0026395 Sechium edule
SEGI_16652 Sequoiadendron giganteum
SGA_v2.0_scaffold243G44289 Striga asiatica
SGA_v2.0_scaffold4G02376 Striga asiatica
SMO244G0014 Selaginella moellendorffii
SMO281G0003 Selaginella moellendorffii
Solyc08g066550.3 Solanum lycopersicum
Solyc11g071190.3 Solanum lycopersicum
Sopen08g020390 Solanum pennellii
Sp6g32000 Schrenkiella parvula
TAR626G0255 Trochodendron aralioides
THA.LOC104799702 Tarenaya hassleriana
Thecc.09G045700 Theobroma cacao
Thhalv10014372m.g Eutrema salsugineum
TPR.G15103 Trifolium pratense
TWI34G0404 Tripterygium wilfordii
TWI63G0268 Tripterygium wilfordii
TWI63G1513 Tripterygium wilfordii
unitig_32.g11474 Utricularia gibba
vmacro23277 Vaccinium macrocarpon
VMungo1309G1803 Vigna mungo
Zm00001eb277580 Zea mays
Zm00001eb384710 Zea mays

User provided reference genes

Program Settings