Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p04840 Brassica napus
Aa31LG11G8120 Aethionema arabicum
Actinidia31554 Actinidia chinensis
Ah.13g071330 Amaranthus hybridus
AL8G23240 Arabidopsis lyrata
Aqoxy2G02699 Aquilegia oxysepala
AT5G49480 Arabidopsis thaliana
ATR0693G356 Amborella trichopoda
Atru.chr4.3040 Acer truncatum
AUR62016225 Chenopodium quinoa
AUR62039264 Chenopodium quinoa
BcaB04g19614 Brassica carinata
BcaC04g23738 Brassica carinata
BolC9t53448H Brassica oleracea
BraA09t36121Z Brassica rapa
C09p05220 Brassica napus
CAN.G97.9 Capsicum annuum
CANSAT78G2193 Cannabis sativa
CARHR182020 Cardamine hirsuta
Carub.0008s0934 Capsella rubella
Ca_21435_v3 Cicer arietinum L.
CBR_g28479 Chara braunii
Cc03_g00700 Coffea canephora
CDE08G1648 Ceratophyllum demersum
Cfa015301 Carpinus fangiana
Ciclev10006076m.g Citrus clementina
Ciclev10006337m.g Citrus clementina
CiPaw.01G137000 Carya illinoinensis
ClCG05G006630 Citrullus lanatus
COL.COLO4_34598 Corchorus olitorius
Cpa.g.sc9.45 Carica papaya
Cre10.g466650 Chlamydomonas reinhardtii
CsaV3_3G015240 Cucumis sativus L.
CSS0012943 Camellia sinensis var. sinensis
CSS0018156 Camellia sinensis var. sinensis
CSS0034436 Camellia sinensis var. sinensis
CSS0043064 Camellia sinensis var. sinensis
CSS0047932 Camellia sinensis var. sinensis
DCAR_030462 Daucus carota
Dinv44276 Davidia involucrata
Duzib052G0321 Durio zibethinus
Duzib151G0686 Durio zibethinus
Duzib212G0974 Durio zibethinus
ECA246G4755 Erigeron canadensis
EL10Ac3g05523 Beta vulgaris
Eucgr.H04056 Eucalyptus grandis
FAN07G1803 Fragaria x ananassa
FvH4_4g19970 Fragaria vesca
Glyma.07G238700 Glycine max
Glyma.17G034900 Glycine max
Gohir.A09G234100 Gossypium hirsutum
Gohir.A10G173200 Gossypium hirsutum
Gohir.D09G234900 Gossypium hirsutum
Gohir.D10G179700 Gossypium hirsutum
Gorai.006G257800 Gossypium raimondii
Gorai.011G201000 Gossypium raimondii
GSVIVG01034916001 Vitis vinifera
HanXRQChr05g0146001 Helianthus annuus
HanXRQChr11g0353881 Helianthus annuus
Haze_01313 Corylus avellana
Haze_26178 Corylus avellana
Hma1.2p1_0013F.1_g008420 Hydrangea macrophylla
HPP92_005426 Vanilla planifolia
HPP92_008930 Vanilla planifolia
Lalb_Chr07g0182041 Lupinus albus
Lalb_Chr13g0298531 Lupinus albus
Lj1g0017970 Lotus japonicus
Lj6P692T31 Lonicera japonica
Lsat_1_v5_gn_1_41620 Lactuca sativa
Lsat_1_v5_gn_6_116540 Lactuca sativa
Lsat_1_v5_gn_6_116560 Lactuca sativa
Manes.03G205900 Manihot esculenta
Manes.15G000900 Manihot esculenta
Mapoly0033s0008 Marchantia polymorpha
MD04G1036600 Malus domestica
MD13G1151300 Malus domestica
MD16G1152300 Malus domestica
Medtr4g122260 Medicago truncatula
MELO3C006721.2 Cucumis melo
Migut.G00072 Erythranthe guttata
MSTRG.10157 Avicennia marina
Nitab4.5_0000655g0030 Nicotiana tabacum
Nitab4.5_0000931g0030 Nicotiana tabacum
Nn3g21749 Nelumbo nucifera
Oeu038773.1 Olea europaea
Oeu038774.1 Olea europaea
Oeu038775.1 Olea europaea
Oeu038777.1 Olea europaea
Oeu042670.1 Olea europaea
Os03g0310800 Oryza sativa ssp. japonica
Peaxi162Scf00228g00041 Petunia axillaris
PGR004G1138 Punica granatum
PGR031G3428 Punica granatum
PGSC0003DMG400001204 Solanum tuberosum
Phvul.003G115800 Phaseolus vulgaris
Phvul.005G129600 Phaseolus vulgaris
Potri.008G103900 Populus trichocarpa
Potri.010G146900 Populus trichocarpa
Pp3c16_2040 Physcomitrium patens
Pp3c25_1480 Physcomitrium patens
Prupe.1G115600 Prunus persica
Psat0s4013g0040 Pisum sativum
PSO210G7669 Papaver somniferum
PSO761G0247 Papaver somniferum
QL06p012626 Quercus lobata
RcHm_v2.0_Chr4g0425671 Rosa chinensis
Rhsim02G0003100 Rhododendron simsii
Rhsim04G0240200 Rhododendron simsii
Sabra08G0078500 Salix brachista
Sabra10G0113300 Salix brachista
SalBow8G4845 Salvia bowleyana
Sc19g0003080 Simmondsia chinensis
Sed0018605 Sechium edule
SEGI_01581 Sequoiadendron giganteum
SEGI_03909 Sequoiadendron giganteum
SEGI_08802 Sequoiadendron giganteum
SGA_v2.0_scaffold20G09168 Striga asiatica
SGA_v2.0_scaffold64G22102 Striga asiatica
Solyc01g058720.4 Solanum lycopersicum
Sopen01g024580 Solanum pennellii
Sp2g19800 Schrenkiella parvula
SpUn0021_0050 Schrenkiella parvula
TAR362G0119 Trochodendron aralioides
TAR633G1133 Trochodendron aralioides
THA.LOC104818878 Tarenaya hassleriana
Thecc.04G302600 Theobroma cacao
TPR.G25406 Trifolium pratense
TWI09G1568 Tripterygium wilfordii
TWI53G1140 Tripterygium wilfordii
unitig_32.g11850 Utricularia gibba
vmacro08029 Vaccinium macrocarpon
vmacro15178 Vaccinium macrocarpon
VMungo1215G2980 Vigna mungo
Zm00001eb395970 Zea mays

User provided reference genes

Program Settings