Gene: AT5G49480

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G49480
  • Transcript Identifier AT5G49480.1
  • Gene Type Coding gene
  • Location Chr5 : 20070812-20071294 : positive

Gene Family Information

  • ID HOM05D006035
  • #Genes/#Species 131/90
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G49480.1
  • symbol CP1
  • Alias ATCP1,Ca2+-binding protein 1
  • uniprot Q9FDX6

Descriptions

  • Description Ca2 -binding protein 1
  • Computational description Ca2 -binding protein 1 (CP1); FUNCTIONS IN: calcium ion binding; INVOLVED IN: hyperosmotic salinity response; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: calmodulin 1 (TAIR:AT5G37780.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042538
IEP
Gene Ontologyhyperosmotic salinity response1
GO:0051603
IBA
Gene Ontologyproteolysis involved in cellular protein catabolic process2
GO:0008150
ND
Gene Ontologybiological_process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005509
IEA
GOA Databasecalcium ion binding
GO:0005509
IDA
Gene Ontologycalcium ion binding1
GO:0005509
IEA
InterProcalcium ion binding
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0004197
IBA
Gene Ontologycysteine-type endopeptidase activity2
GO:0003674
ND
Gene Ontologymolecular_function

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005829
IEA
GOA Databasecytosol
GO:0005829
IDA
Gene Ontologycytosol1
GO:0005764
IBA
Gene Ontologylysosome2
GO:0005615
IBA
Gene Ontologyextracellular space2
GO:0009536
HDA
Gene Ontologyplastid3
GO:0005618
HDA
Gene Ontologycell wall4
GO:0009507
ISM
Gene Ontologychloroplast
GO:0005576
ISM
Gene Ontologyextracellular region
GO:0005575
ND
Gene Ontologycellular_component

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002048 EF-hand domain
IPR011992 EF-hand domain pair
Mapman id Description
35.1 not assigned.annotated