Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p15920 Brassica napus
Aa31LG7G4330 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3947 Anthoceros agrestis
Actinidia29179 Actinidia chinensis
Actinidia35920 Actinidia chinensis
AL1G32520 Arabidopsis lyrata
Aqoxy5G02725 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.8VB164 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZABD6C Arachis hypogaea
AT1G19800 Arabidopsis thaliana
ATR0681G262 Amborella trichopoda
Atru.chr7.136 Acer truncatum
AUR62010234 Chenopodium quinoa
AUR62013219 Chenopodium quinoa
BcaB03g12900 Brassica carinata
BcaB07g31994 Brassica carinata
BcaC05g25857 Brassica carinata
BcaC07g38997 Brassica carinata
BolC5t30530H Brassica oleracea
BolC8t49608H Brassica oleracea
BraA06t24698Z Brassica rapa
C05p18230 Brassica napus
C08p19710 Brassica napus
CAN.G1273.6 Capsicum annuum
CAN.G1648.2 Capsicum annuum
CANSAT78G0984 Cannabis sativa
CARHR020310 Cardamine hirsuta
Carub.0001s1933 Capsella rubella
Ca_26812_v3 Cicer arietinum L.
CBR_g24384 Chara braunii
CBR_g4088 Chara braunii
CBR_g4089 Chara braunii
Cc01_g18470 Coffea canephora
Cc11_g03530 Coffea canephora
CDE02G1973 Ceratophyllum demersum
CDE11G0925 Ceratophyllum demersum
Cfa014468 Carpinus fangiana
Ciclev10020911m.g Citrus clementina
CiPaw.01G109900 Carya illinoinensis
ClCG00G002040 Citrullus lanatus
ClCG08G003960 Citrullus lanatus
COL.COLO4_08690 Corchorus olitorius
Cpa.g.sc8.310 Carica papaya
Cre06.g268200 Chlamydomonas reinhardtii
CsaV3_6G003160 Cucumis sativus L.
CSS0046220 Camellia sinensis var. sinensis
DCAR_018469 Daucus carota
DCAR_018470 Daucus carota
Dinv27163 Davidia involucrata
Duzib151G0749 Durio zibethinus
Duzib212G0264 Durio zibethinus
ECA232G4773 Erigeron canadensis
EL10Ac9g21576 Beta vulgaris
Eucgr.E02433 Eucalyptus grandis
FAN11G3688 Fragaria x ananassa
FAN16G2920 Fragaria x ananassa
FAN21G2901 Fragaria x ananassa
FAN25G3010 Fragaria x ananassa
FvH4_3g16560 Fragaria vesca
Glyma.10G181900 Glycine max
Glyma.20G208100 Glycine max
Gohir.A09G209100 Gossypium hirsutum
Gohir.A10G133200 Gossypium hirsutum
Gohir.D09G202500 Gossypium hirsutum
Gohir.D10G133600 Gossypium hirsutum
Gorai.006G226400 Gossypium raimondii
Gorai.011G147400 Gossypium raimondii
GSVIVG01031642001 Vitis vinifera
HanXRQChr10g0315741 Helianthus annuus
Haze_05998 Corylus avellana
Haze_12970 Corylus avellana
Hma1.2p1_0349F.1_g132330 Hydrangea macrophylla
HPP92_028331 Vanilla planifolia
Hund00109 Selenicereus undatus
Lalb_Chr12g0205911 Lupinus albus
Lalb_Chr12g0209371 Lupinus albus
Lj2P1154T29 Lonicera japonica
Lj3g0022648 Lotus japonicus
Lsat_1_v5_gn_1_5881 Lactuca sativa
Manes.16G070000 Manihot esculenta
Mapoly0204s0010 Marchantia polymorpha
MBI07_g20439_MAGBIO Magnolia biondii
MCO01G348 Micromonas commoda
MD05G1209200 Malus domestica
MD10G1195600 Malus domestica
Medtr3g005100 Medicago truncatula
Medtr3g008040 Medicago truncatula
MELO3C011502.2 Cucumis melo
Migut.D00413 Erythranthe guttata
MSTRG.18314 Avicennia marina
Nitab4.5_0000368g0340 Nicotiana tabacum
Nitab4.5_0006072g0030 Nicotiana tabacum
Nn3g18591 Nelumbo nucifera
Oeu061431.3 Olea europaea
Os04g0553000 Oryza sativa ssp. japonica
Peaxi162Scf00673g00002 Petunia axillaris
PGR083G2576 Punica granatum
PGSC0003DMG402024734 Solanum tuberosum
Phvul.008G142801 Phaseolus vulgaris
Potri.002G234400 Populus trichocarpa
Pp3c1_16480 Physcomitrium patens
PRCOL_00005194 Prasinoderma coloniale
Prupe.4G148300 Prunus persica
Psat5g221840 Pisum sativum
PSO063G3984 Papaver somniferum
PSO339G5872 Papaver somniferum
QL05p063015 Quercus lobata
RcHm_v2.0_Chr5g0027591 Rosa chinensis
Rhsim02G0070200 Rhododendron simsii
Sabra02G0178800 Salix brachista
SalBow4G1474 Salvia bowleyana
SalBow4G1598 Salvia bowleyana
Sc08g0001750 Simmondsia chinensis
Sed0000259 Sechium edule
SEGI_17332 Sequoiadendron giganteum
SGA_v2.0_scaffold90G27691 Striga asiatica
SHI22008 Sapria himalayana
SMO367G0743 Selaginella moellendorffii
Solyc01g100250.3 Solanum lycopersicum
Sopen01g043760 Solanum pennellii
Sp1g17610 Schrenkiella parvula
TAR375G0642 Trochodendron aralioides
THA.LOC104827705 Tarenaya hassleriana
Thecc.04G188000 Theobroma cacao
Thhalv10008071m.g Eutrema salsugineum
TPR.G25529 Trifolium pratense
TPR.G37202 Trifolium pratense
TWI34G1086 Tripterygium wilfordii
TWI60G1035 Tripterygium wilfordii
unitig_22.g5460 Utricularia gibba
unitig_22.g5461 Utricularia gibba
vmacro15598 Vaccinium macrocarpon
VMungo0720G0134 Vigna mungo
Zm00001eb074560 Zea mays

User provided reference genes

Program Settings