Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p17350 Brassica napus
A04p23800 Brassica napus
Aa31LG5G5860 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2999 Anthoceros agrestis
Actinidia10986 Actinidia chinensis
Actinidia11121 Actinidia chinensis
Ah.01g003910 Amaranthus hybridus
AL4G26180 Arabidopsis lyrata
Aqoxy1G02238 Aquilegia oxysepala
Aqoxy6G01583 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.ERJJ2A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N92LMW Arachis hypogaea
AT2G31060 Arabidopsis thaliana
ATR0602G230 Amborella trichopoda
Atru.chr6.2843 Acer truncatum
AUR62024075 Chenopodium quinoa
AUR62035383 Chenopodium quinoa
AUR62035384 Chenopodium quinoa
BcaB01g04069 Brassica carinata
BcaB06g28406 Brassica carinata
BcaB06g28481 Brassica carinata
BcaC01g05982 Brassica carinata
BolC4t27528H Brassica oleracea
BraA03t11007Z Brassica rapa
BraA04t17905Z Brassica rapa
C04p60290 Brassica napus
CAN.G1543.6 Capsicum annuum
CANSAT64G1412 Cannabis sativa
CARHR124590 Cardamine hirsuta
Carub.0004s1229 Capsella rubella
Ca_18904_v3 Cicer arietinum L.
CBR_g48662 Chara braunii
Cc05_g07950 Coffea canephora
Cc05_g07960 Coffea canephora
CDE10G0636 Ceratophyllum demersum
CDE10G1130 Ceratophyllum demersum
Cfa014682 Carpinus fangiana
Cfa021021 Carpinus fangiana
Ciclev10014506m.g Citrus clementina
CiPaw.03G183400 Carya illinoinensis
ClCG00G001850 Citrullus lanatus
ClCG02G002240 Citrullus lanatus
COL.COLO4_22761 Corchorus olitorius
COL.COLO4_22762 Corchorus olitorius
Cpa.g.sc50.1 Carica papaya
Cre13.g606000 Chlamydomonas reinhardtii
CsaV3_7G003270 Cucumis sativus L.
CSS0011338 Camellia sinensis var. sinensis
CSS0038286 Camellia sinensis var. sinensis
DCAR_013050 Daucus carota
Dinv02422 Davidia involucrata
Dinv02423 Davidia involucrata
Dinv19985 Davidia involucrata
Dinv19988 Davidia involucrata
Duzib147G0340 Durio zibethinus
ECA232G3582 Erigeron canadensis
EL10Ac9g20850 Beta vulgaris
Eucgr.A01886 Eucalyptus grandis
FAN05G1008 Fragaria x ananassa
FAN09G1847 Fragaria x ananassa
FAN14G0051 Fragaria x ananassa
FvH4_6g26910 Fragaria vesca
Glyma.06G285200 Glycine max
Glyma.12G120500 Glycine max
Gohir.A05G373200 Gossypium hirsutum
Gohir.D04G042300 Gossypium hirsutum
Gorai.012G047800 Gossypium raimondii
GSVIVG01020652001 Vitis vinifera
HanXRQChr17g0554791 Helianthus annuus
Haze_13286 Corylus avellana
Haze_13287 Corylus avellana
Hma1.2p1_0002F.1_g002430 Hydrangea macrophylla
HPP92_024631 Vanilla planifolia
Hund00987 Selenicereus undatus
Lalb_Chr01g0005901 Lupinus albus
Lalb_Chr19g0135031 Lupinus albus
Lj3g0013597 Lotus japonicus
Lj8C106T3 Lonicera japonica
Lsat_1_v5_gn_0_26281 Lactuca sativa
Lsat_1_v5_gn_8_137561 Lactuca sativa
Lsat_1_v5_gn_8_151100 Lactuca sativa
Manes.13G140000 Manihot esculenta
Mapoly0004s0256 Marchantia polymorpha
MBI06_g34197_MAGBIO Magnolia biondii
MCO16G490 Micromonas commoda
MD09G1241200 Malus domestica
MD17G1234000 Malus domestica
Medtr4g079360 Medicago truncatula
MELO3C018848.2 Cucumis melo
Migut.H02161 Erythranthe guttata
MSTRG.14318 Avicennia marina
Nitab4.5_0002629g0050 Nicotiana tabacum
Nitab4.5_0006973g0050 Nicotiana tabacum
Nn1g06356 Nelumbo nucifera
Oeu064837.1 Olea europaea
Os01g0752700 Oryza sativa ssp. japonica
Peaxi162Scf00189g00130 Petunia axillaris
PGR042G1338 Punica granatum
PGSC0003DMG400009402 Solanum tuberosum
Phvul.011G116300 Phaseolus vulgaris
Potri.013G123700 Populus trichocarpa
Pp3c21_14460 Physcomitrium patens
Prupe.3G126400 Prunus persica
Prupe.3G126600 Prunus persica
PSO063G7058 Papaver somniferum
PSO541G5689 Papaver somniferum
PSO675G3756 Papaver somniferum
QL08p040922 Quercus lobata
RcHm_v2.0_Chr2g0128661 Rosa chinensis
Rhsim04G0072400 Rhododendron simsii
Sabra13G0102700 Salix brachista
SalBow7G3750 Salvia bowleyana
SalBow7G4511 Salvia bowleyana
Sc21g0003560 Simmondsia chinensis
Sed0003615 Sechium edule
Sed0021656 Sechium edule
SEGI_23407 Sequoiadendron giganteum
SGA_v2.0_scaffold109G31124 Striga asiatica
SHI10500 Sapria himalayana
SMO228G0089 Selaginella moellendorffii
Solyc07g053470.4 Solanum lycopersicum
Sopen07g027430 Solanum pennellii
Sp4g13530 Schrenkiella parvula
TAR626G0705 Trochodendron aralioides
THA.LOC104800851 Tarenaya hassleriana
Thecc.01G240200 Theobroma cacao
Thhalv10016352m.g Eutrema salsugineum
TPR.G29325 Trifolium pratense
TWI23G1320 Tripterygium wilfordii
TWI59G1076 Tripterygium wilfordii
unitig_62.g23162 Utricularia gibba
unitig_62.g23163 Utricularia gibba
vmacro09236 Vaccinium macrocarpon
VMungo1127G2025 Vigna mungo
Zm00001eb153490 Zea mays

User provided reference genes

Program Settings