Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p15870 Brassica napus
A03p55330 Brassica napus
Aa31LG4G9600 Aethionema arabicum
Actinidia19626 Actinidia chinensis
AL7G28720 Arabidopsis lyrata
Aqoxy5G01371 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5459VI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X0SJ4P Arachis hypogaea
AT4G24500 Arabidopsis thaliana
ATR0767G016 Amborella trichopoda
Atru.chr13.1002 Acer truncatum
AUR62014355 Chenopodium quinoa
AUR62019098 Chenopodium quinoa
BcaC06g32880 Brassica carinata
BcaC09g50862 Brassica carinata
BolC1t01909H Brassica oleracea
BolC7t45854H Brassica oleracea
BraA01t01521Z Brassica rapa
BraA03t14592Z Brassica rapa
C01p19810 Brassica napus
C07p53620 Brassica napus
CAN.G1700.2 Capsicum annuum
CAN.G475.16 Capsicum annuum
CAN.G475.17 Capsicum annuum
CANSAT11G1699 Cannabis sativa
CARHR231890 Cardamine hirsuta
Carub.0007s1657 Capsella rubella
Ca_05452_v3 Cicer arietinum L.
Cc00_g15770 Coffea canephora
CDE04G0496 Ceratophyllum demersum
CDE06G1720 Ceratophyllum demersum
CDE06G2035 Ceratophyllum demersum
CDE06G2159 Ceratophyllum demersum
Cfa013804 Carpinus fangiana
Ciclev10001506m.g Citrus clementina
CiPaw.03G148200 Carya illinoinensis
CiPaw.07G164600 Carya illinoinensis
ClCG09G016810 Citrullus lanatus
COL.COLO4_35255 Corchorus olitorius
Cpa.g.c29936.2 Carica papaya
CsaV3_2G036230 Cucumis sativus L.
CSS0018086 Camellia sinensis var. sinensis
DCAR_000919 Daucus carota
DCAR_002596 Daucus carota
DCAR_023481 Daucus carota
Dinv42605 Davidia involucrata
Dinv44865 Davidia involucrata
Duzib106G1137 Durio zibethinus
Duzib128G1071 Durio zibethinus
ECA240G2279 Erigeron canadensis
EL10Ac1g00506 Beta vulgaris
Eucgr.H00032 Eucalyptus grandis
Eucgr.L02666 Eucalyptus grandis
FAN08G3160 Fragaria x ananassa
FAN13G1830 Fragaria x ananassa
FAN18G3411 Fragaria x ananassa
FvH4_5g34870 Fragaria vesca
Glyma.02G215100 Glycine max
Glyma.14G182400 Glycine max
Gohir.A05G320600 Gossypium hirsutum
Gohir.D05G322800 Gossypium hirsutum
Gorai.009G346500 Gossypium raimondii
GSVIVG01009188001 Vitis vinifera
HanXRQChr03g0093751 Helianthus annuus
HanXRQChr13g0425001 Helianthus annuus
HanXRQChr13g0425671 Helianthus annuus
HanXRQChr13g0425801 Helianthus annuus
HanXRQChr15g0487561 Helianthus annuus
Haze_22467 Corylus avellana
Haze_22468 Corylus avellana
HPP92_021096 Vanilla planifolia
Hund26817 Selenicereus undatus
Lalb_Chr17g0344581 Lupinus albus
Lj4A738G22 Lonicera japonica
Lj6g0019377 Lotus japonicus
LjContig00408g0013719 Lotus japonicus
Lsat_1_v5_gn_3_133380 Lactuca sativa
Manes.18G058066 Manihot esculenta
MBI16_g12475_MAGBIO Magnolia biondii
MD08G1199700 Malus domestica
Medtr5g066450 Medicago truncatula
MELO3C008828.2 Cucumis melo
MELO3C021835.2 Cucumis melo
Migut.C00706 Erythranthe guttata
Nitab4.5_0000131g0110 Nicotiana tabacum
Nitab4.5_0000354g0120 Nicotiana tabacum
Nitab4.5_0019796g0010 Nicotiana tabacum
Nitab4.5_0025222g0020 Nicotiana tabacum
Nn5g29866 Nelumbo nucifera
Nn6g34170 Nelumbo nucifera
Oeu034401.1 Olea europaea
Oeu063699.1 Olea europaea
Peaxi162Scf00160g00103 Petunia axillaris
Peaxi162Scf00454g00211 Petunia axillaris
PGR042G0630 Punica granatum
PGSC0003DMG400002050 Solanum tuberosum
PGSC0003DMG400009339 Solanum tuberosum
Phvul.008G182500 Phaseolus vulgaris
Potri.002G111500 Populus trichocarpa
Potri.005G153300 Populus trichocarpa
Pp3c22_17340 Physcomitrium patens
Prupe.1G533200 Prunus persica
Psat2g065160 Pisum sativum
PSO144G0019 Papaver somniferum
PSO170G4643 Papaver somniferum
PSO210G5625 Papaver somniferum
QL09p017955 Quercus lobata
QL12p023212 Quercus lobata
RcHm_v2.0_Chr7g0235791 Rosa chinensis
Rhsim07G0212300 Rhododendron simsii
Sabra02G0088000 Salix brachista
SalBow7G4402 Salvia bowleyana
Sc04g0007160 Simmondsia chinensis
Sed0021215 Sechium edule
Sed0021655 Sechium edule
SEGI_00308 Sequoiadendron giganteum
SEGI_15482 Sequoiadendron giganteum
SEGI_29730 Sequoiadendron giganteum
SGA_v2.0_scaffold20G09128 Striga asiatica
SGA_v2.0_scaffold24G10238 Striga asiatica
SHI11237 Sapria himalayana
SHI11238 Sapria himalayana
Solyc04g076410.3 Solanum lycopersicum
Solyc12g087990.3 Solanum lycopersicum
Sopen04g030170 Solanum pennellii
Sopen12g030020 Solanum pennellii
Sp7g22490 Schrenkiella parvula
TAR376G0788 Trochodendron aralioides
TAR381G0479 Trochodendron aralioides
THA.LOC104799788 Tarenaya hassleriana
THA.LOC104806890 Tarenaya hassleriana
Thecc.08G071800 Theobroma cacao
Thhalv10025760m.g Eutrema salsugineum
TPR.G34712 Trifolium pratense
TWI12G0152 Tripterygium wilfordii
TWI56G0486 Tripterygium wilfordii
unitig_578.g16728 Utricularia gibba
vmacro17886 Vaccinium macrocarpon
VMungo1127G1493 Vigna mungo

User provided reference genes

Program Settings