Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p20760 Brassica napus
A08p12610 Brassica napus
Aa31LG2G12780 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.834 Anthoceros agrestis
Actinidia15432 Actinidia chinensis
Actinidia15433 Actinidia chinensis
Actinidia16995 Actinidia chinensis
Actinidia16996 Actinidia chinensis
Ah.00g000290 Amaranthus hybridus
AL7G38120 Arabidopsis lyrata
Aqoxy7G02510 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.CZI2M2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GBSD9W Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KG3JNQ Arachis hypogaea
AT4G16630 Arabidopsis thaliana
ATR0090G023 Amborella trichopoda
Atru.chr11.1620 Acer truncatum
Atru.chr13.268 Acer truncatum
AUR62040549 Chenopodium quinoa
AUR62041487 Chenopodium quinoa
BcaB07g32127 Brassica carinata
BcaC05g26047 Brassica carinata
BcaC07g38004 Brassica carinata
BcaC09g50392 Brassica carinata
BolC1t02546H Brassica oleracea
BolC8t48384H Brassica oleracea
BraA01t01995Z Brassica rapa
BraA08t33251Z Brassica rapa
CAN.G311.43 Capsicum annuum
CANSAT64G1040 Cannabis sativa
CARHR223130 Cardamine hirsuta
Carub.0007s2477 Capsella rubella
Ca_14808_v3 Cicer arietinum L.
Cc00_g14370 Coffea canephora
CDE02G3483 Ceratophyllum demersum
CDE04G2813 Ceratophyllum demersum
CDE04G2938 Ceratophyllum demersum
Ciclev10000409m.g Citrus clementina
CiPaw.07G148200 Carya illinoinensis
ClCG09G010550 Citrullus lanatus
COL.COLO4_26129 Corchorus olitorius
Cpa.g.sc29.166 Carica papaya
Cpa.g.sc29.167 Carica papaya
Cre10.g420900 Chlamydomonas reinhardtii
CsaV3_3G045070 Cucumis sativus L.
CSS0021497 Camellia sinensis var. sinensis
CSS0023183 Camellia sinensis var. sinensis
DCAR_023755 Daucus carota
Dinv15073 Davidia involucrata
Dinv39530 Davidia involucrata
Duzib093G1385 Durio zibethinus
ECA238G1643 Erigeron canadensis
ECA240G2120 Erigeron canadensis
ECA240G3517 Erigeron canadensis
EL10Ac1g02170 Beta vulgaris
Eucgr.A00214 Eucalyptus grandis
FAN15G3432 Fragaria x ananassa
FAN20G2235 Fragaria x ananassa
FAN27G2308 Fragaria x ananassa
FvH4_2g38260 Fragaria vesca
Glyma.08G313100 Glycine max
Glyma.09G101666 Glycine max
Glyma.18G101600 Glycine max
Gohir.A05G185800 Gossypium hirsutum
Gohir.D05G188600 Gossypium hirsutum
Gorai.009G193900 Gossypium raimondii
GSVIVG01009935001 Vitis vinifera
HanXRQChr13g0412281 Helianthus annuus
HanXRQChr16g0529991 Helianthus annuus
Haze_22652 Corylus avellana
Hma1.2p1_0274F.1_g110360 Hydrangea macrophylla
Hma1.2p1_0274F.1_g110370 Hydrangea macrophylla
HPP92_018598 Vanilla planifolia
Hund01599 Selenicereus undatus
Lalb_Chr20g0113951 Lupinus albus
Lj1C1148G8 Lonicera japonica
Lj6g0002233 Lotus japonicus
Lj6g0027027 Lotus japonicus
Lsat_1_v5_gn_8_10200 Lactuca sativa
Manes.18G012300 Manihot esculenta
Mapoly0090s0088 Marchantia polymorpha
MBI05_g23391_MAGBIO Magnolia biondii
MCO16G119 Micromonas commoda
MD01G1061100 Malus domestica
MD15G1442700 Malus domestica
Medtr2g041140 Medicago truncatula
Medtr3g049990 Medicago truncatula
MELO3C003842.2 Cucumis melo
MELO3C029961.2 Cucumis melo
Migut.C00853 Erythranthe guttata
MSTRG.25259 Avicennia marina
Nitab4.5_0005970g0030 Nicotiana tabacum
Nn5g30743 Nelumbo nucifera
Nn5g30744 Nelumbo nucifera
Oeu007360.3 Olea europaea
Oeu054486.1 Olea europaea
Oeu055068.2 Olea europaea
Os12g0481100 Oryza sativa ssp. japonica
Peaxi162Scf00553g00813 Petunia axillaris
PGR042G0181 Punica granatum
PGSC0003DMG400009873 Solanum tuberosum
Phvul.006G039100 Phaseolus vulgaris
Potri.005G241300 Populus trichocarpa
Pp3c9_14310 Physcomitrium patens
PRCOL_00003854 Prasinoderma coloniale
Prupe.1G363600 Prunus persica
Prupe.3G157600 Prunus persica
Psat2g061120 Pisum sativum
Psat5g176240 Pisum sativum
PSO541G2252 Papaver somniferum
PSO675G8850 Papaver somniferum
QL02p011979 Quercus lobata
QL12p004290 Quercus lobata
RcHm_v2.0_Chr6g0303111 Rosa chinensis
Rhsim06G0019900 Rhododendron simsii
Sabra05G0186800 Salix brachista
Sc15g0004880 Simmondsia chinensis
Sed0016675 Sechium edule
SEGI_06822 Sequoiadendron giganteum
SEGI_11886 Sequoiadendron giganteum
SGA_v2.0_scaffold92G28212 Striga asiatica
SHI08056 Sapria himalayana
SMO169G0064 Selaginella moellendorffii
Solyc04g081580.4 Solanum lycopersicum
Sopen04g035190 Solanum pennellii
Sp7g15250 Schrenkiella parvula
TAR376G1207 Trochodendron aralioides
TAR628G0705 Trochodendron aralioides
THA.LOC104815496 Tarenaya hassleriana
Thecc.08G046400 Theobroma cacao
Thhalv10024452m.g Eutrema salsugineum
TPR.G11499 Trifolium pratense
TWI36G0775 Tripterygium wilfordii
TWI56G0435 Tripterygium wilfordii
unitig_32.g11227 Utricularia gibba
vmacro07575 Vaccinium macrocarpon
VMungo0540G0072 Vigna mungo
Zm00001eb102610 Zea mays
Zm00001eb318210 Zea mays

User provided reference genes

Program Settings