Gene: PGSC0003DMG400009873

General Information

Structural Information

Species Solanum tuberosum
Gene Identifier PGSC0003DMG400009873
Transcript Identifier PGSC0003DMT400025551
Gene Type Coding gene
Location ST4.03ch04 : 70939118-70945935 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000032
#Genes/#Species 5307/100
Phylogenetic origin

ID ORTHO05D006669
#Genes/#Species 139/97
Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

pacid 37473084
id PGSC0003DMG400009873.v4.03
uniprot M1ALL5

Descriptions

Short descriptions
Ortholog descriptions

Description Dead box ATP-dependent RNA helicase

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0016070	ISO	PLAZA Integrative Orthology	RNA metabolic process	Solyc04g081580.4

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0003676	IEA	GOA Database	nucleic acid binding
GO:0003676	IEA	InterPro	nucleic acid binding
GO:0005524	IEA	GOA Database	ATP binding
GO:0005524	IEA	InterPro	ATP binding
GO:0000166	IEA	GOA Database	nucleotide binding
GO:0016787	IEA	GOA Database	hydrolase activity
GO:0004386	IEA	GOA Database	helicase activity
GO:0003724	IEA	GOA Database	RNA helicase activity

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR027417	P-loop containing nucleoside triphosphate hydrolase
IPR014001	Helicase superfamily 1/2, ATP-binding domain
IPR001650	Helicase, C-terminal
IPR011545	DEAD/DEAH box helicase domain

Mapman id	Description
35.1	not assigned.annotated