Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p07800 Brassica napus
A03p12300 Brassica napus
A10p15920 Brassica napus
Aa31LG11G100 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2801 Anthoceros agrestis
Actinidia18552 Actinidia chinensis
Ah.04g163570 Amaranthus hybridus
AL8G34430 Arabidopsis lyrata
Aqoxy1G01089 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.A3GNNU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BA27WC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JN2MSV Arachis hypogaea
AT5G58330 Arabidopsis thaliana
ATR0043G006 Amborella trichopoda
Atru.chr12.894 Acer truncatum
AUR62041526 Chenopodium quinoa
AUR62041538 Chenopodium quinoa
BcaB01g01470 Brassica carinata
BcaB01g04530 Brassica carinata
BcaB05g22421 Brassica carinata
BcaB08g36170 Brassica carinata
BcaC03g14105 Brassica carinata
BcaC04g19877 Brassica carinata
BolC2t07456H Brassica oleracea
BolC3t13886H Brassica oleracea
BolC9t57877H Brassica oleracea
BraA02t05853Z Brassica rapa
BraA03t10541Z Brassica rapa
BraA10t43632Z Brassica rapa
C02p13440 Brassica napus
C03p14440 Brassica napus
C09p50210 Brassica napus
CAN.G459.16 Capsicum annuum
CANSAT56G0361 Cannabis sativa
CARHR272140 Cardamine hirsuta
Carub.0008s1887 Capsella rubella
Ca_10450_v3 Cicer arietinum L.
Cc02_g10620 Coffea canephora
CDE06G0229 Ceratophyllum demersum
Cfa001780 Carpinus fangiana
Cfa001781 Carpinus fangiana
Ciclev10031559m.g Citrus clementina
CiPaw.01G265800 Carya illinoinensis
CiPaw.02G170300 Carya illinoinensis
ClCG05G021390 Citrullus lanatus
COL.COLO4_32898 Corchorus olitorius
Cpa.g.sc706.3 Carica papaya
Cre09.g410700 Chlamydomonas reinhardtii
CsaV3_5G035850 Cucumis sativus L.
CSS0028096 Camellia sinensis var. sinensis
CSS0050119 Camellia sinensis var. sinensis
DCAR_006393 Daucus carota
Dinv31253 Davidia involucrata
Dinv36366 Davidia involucrata
Duzib114G0776 Durio zibethinus
ECA233G0334 Erigeron canadensis
EL10As9g23933 Beta vulgaris
Eucgr.J01037 Eucalyptus grandis
FAN01G0893 Fragaria x ananassa
FAN03G3480 Fragaria x ananassa
FAN06G2033 Fragaria x ananassa
FAN10G1604 Fragaria x ananassa
FvH4_7g06530 Fragaria vesca
Glyma.10G197700 Glycine max
Glyma.20G192200 Glycine max
Gohir.A05G409300 Gossypium hirsutum
Gohir.D04G006100 Gossypium hirsutum
Gorai.012G007300 Gossypium raimondii
GSVIVG01016172001 Vitis vinifera
HanXRQChr08g0218231 Helianthus annuus
HanXRQChr12g0367851 Helianthus annuus
HanXRQChr12g0367861 Helianthus annuus
HanXRQChr12g0368681 Helianthus annuus
HanXRQChr12g0368891 Helianthus annuus
Haze_16770 Corylus avellana
Hma1.2p1_2971F.1_g331080 Hydrangea macrophylla
HPP92_025781 Vanilla planifolia
Hund06761 Selenicereus undatus
Lalb_Chr02g0151061 Lupinus albus
Lalb_Chr06g0169961 Lupinus albus
Lj2A23T73 Lonicera japonica
Lj5g0000122 Lotus japonicus
Lsat_1_v5_gn_8_17481 Lactuca sativa
Manes.07G133100 Manihot esculenta
Manes.10G052600 Manihot esculenta
Mapoly0031s0108 Marchantia polymorpha
MCO16G043 Micromonas commoda
MD02G1243100 Malus domestica
MD07G1073300 Malus domestica
Medtr1g090730 Medicago truncatula
MELO3C012389.2 Cucumis melo
Migut.F01686 Erythranthe guttata
MSTRG.9133 Avicennia marina
Nitab4.5_0000107g0180 Nicotiana tabacum
Nitab4.5_0001461g0060 Nicotiana tabacum
Nitab4.5_0002717g0040 Nicotiana tabacum
Nitab4.5_0007550g0010 Nicotiana tabacum
Nn3g19101 Nelumbo nucifera
Nn6g35211 Nelumbo nucifera
Oeu035817.4 Olea europaea
Oeu060294.1 Olea europaea
Os08g0562100 Oryza sativa ssp. japonica
Peaxi162Scf01105g00217 Petunia axillaris
PGR044G1963 Punica granatum
PGSC0003DMG400031063 Solanum tuberosum
Phvul.007G140600 Phaseolus vulgaris
Potri.008G031700 Populus trichocarpa
Pp3c14_16940 Physcomitrium patens
Pp3c17_20310 Physcomitrium patens
Pp3c2_2120 Physcomitrium patens
PRCOL_00004283 Prasinoderma coloniale
Prupe.2G091600 Prunus persica
Psat6g173040 Pisum sativum
PSO063G4655 Papaver somniferum
PSO339G2067 Papaver somniferum
QL08p053170 Quercus lobata
RcHm_v2.0_Chr1g0334961 Rosa chinensis
Rhsim03G0111900 Rhododendron simsii
Sabra08G0020700 Salix brachista
SalBow6G5416 Salvia bowleyana
Sc09g0005860 Simmondsia chinensis
Sed0004705 Sechium edule
Sed0013606 Sechium edule
SEGI_23614 Sequoiadendron giganteum
SGA_v2.0_scaffold41G15740 Striga asiatica
SMO119G0510 Selaginella moellendorffii
Solyc03g071590.3 Solanum lycopersicum
Solyc11g007990.2 Solanum lycopersicum
Sopen03g019880 Solanum pennellii
Sopen11g003850 Solanum pennellii
Sp6g19990 Schrenkiella parvula
TAR369G1116 Trochodendron aralioides
THA.LOC104824214 Tarenaya hassleriana
Thecc.10G088900 Theobroma cacao
Thhalv10013555m.g Eutrema salsugineum
TPR.G37770 Trifolium pratense
TWI38G1270 Tripterygium wilfordii
unitig_26.g9462 Utricularia gibba
vmacro07197 Vaccinium macrocarpon
VMungo0720G0921 Vigna mungo
Zm00001eb038930 Zea mays

User provided reference genes

Program Settings