Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p11320 Brassica napus
A10p10560 Brassica napus
Aa31LG3G9400 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.762 Anthoceros agrestis
Actinidia08664 Actinidia chinensis
Actinidia34231 Actinidia chinensis
AL8G27700 Arabidopsis lyrata
Aqoxy2G00110 Aquilegia oxysepala
Aqoxy7G03390 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5IWG5U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6AA68Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.AF7P3K Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G3VF9V Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T9K8GJ Arachis hypogaea
AT5G53070 Arabidopsis thaliana
ATR0564G295 Amborella trichopoda
Atru.chr1.1611 Acer truncatum
AUR62002807 Chenopodium quinoa
AUR62014115 Chenopodium quinoa
BcaB08g35669 Brassica carinata
BcaC03g14459 Brassica carinata
BcaC04g20510 Brassica carinata
BolC2t08015H Brassica oleracea
BolC9t57154H Brassica oleracea
BraA02t06194Z Brassica rapa
BraA10t43140Z Brassica rapa
C02p18700 Brassica napus
C09p42780 Brassica napus
CANSAT21G1202 Cannabis sativa
CARHR266090 Cardamine hirsuta
Carub.0008s1327 Capsella rubella
Ca_10483_v3 Cicer arietinum L.
CBR_g30099 Chara braunii
Cc01_g04130 Coffea canephora
CDE01G0034 Ceratophyllum demersum
CDE02G4591 Ceratophyllum demersum
Cfa016214 Carpinus fangiana
Ciclev10022175m.g Citrus clementina
Ciclev10023389m.g Citrus clementina
Ciclev10023889m.g Citrus clementina
Ciclev10024016m.g Citrus clementina
CiPaw.06G045000 Carya illinoinensis
ClCG05G009030 Citrullus lanatus
COL.COLO4_38546 Corchorus olitorius
Cpa.g.sc69.87 Carica papaya
CsaV3_3G019750 Cucumis sativus L.
CSS0019342 Camellia sinensis var. sinensis
DCAR_008951 Daucus carota
Dinv21061 Davidia involucrata
Duzib114G0832 Durio zibethinus
Duzib128G1952 Durio zibethinus
ECA236G4645 Erigeron canadensis
EL10Ac3g05547 Beta vulgaris
Eucgr.H01489 Eucalyptus grandis
FAN10G0352 Fragaria x ananassa
FvH4_7g32000 Fragaria vesca
Glyma.06G288700 Glycine max
Glyma.16G061500 Glycine max
Glyma.19G085300 Glycine max
Gohir.A04G061600 Gossypium hirsutum
Gohir.A05G287800 Gossypium hirsutum
Gohir.A07G020100 Gossypium hirsutum
Gohir.A08G051700 Gossypium hirsutum
Gohir.A10G000100 Gossypium hirsutum
Gohir.A10G201500 Gossypium hirsutum
Gohir.A11G223000 Gossypium hirsutum
Gohir.A12G028500 Gossypium hirsutum
Gohir.A12G032500 Gossypium hirsutum
Gohir.A12G115900 Gossypium hirsutum
Gohir.D01G152400 Gossypium hirsutum
Gohir.D05G289000 Gossypium hirsutum
Gohir.D05G384500 Gossypium hirsutum
Gohir.D09G028700 Gossypium hirsutum
Gorai.009G304100 Gossypium raimondii
GSVIVG01038570001 Vitis vinifera
HanXRQChr04g0128021 Helianthus annuus
HanXRQChr16g0505961 Helianthus annuus
Haze_00229 Corylus avellana
Hma1.2p1_1507F.1_g287680 Hydrangea macrophylla
Hma1.2p1_1507F.1_g287690 Hydrangea macrophylla
HPP92_008880 Vanilla planifolia
Hund20626 Selenicereus undatus
Lalb_Chr22g0360521 Lupinus albus
Lj1C1021T21 Lonicera japonica
Lj3g0024506 Lotus japonicus
Lj8A623T20 Lonicera japonica
Lsat_1_v5_gn_7_91160 Lactuca sativa
Lsat_1_v5_gn_9_70281 Lactuca sativa
Manes.01G140200 Manihot esculenta
Mapoly0074s0056 Marchantia polymorpha
MBI14_g34252_MAGBIO Magnolia biondii
MCO07G577 Micromonas commoda
MD07G1293600 Malus domestica
Medtr1g067700 Medicago truncatula
Medtr5g038540 Medicago truncatula
MELO3C019369.2 Cucumis melo
Migut.F01020 Erythranthe guttata
MSTRG.48 Avicennia marina
Nitab4.5_0000006g0650 Nicotiana tabacum
Nitab4.5_0004499g0010 Nicotiana tabacum
Nn8g39914 Nelumbo nucifera
Oeu037051.1 Olea europaea
Oeu060995.2 Olea europaea
Os05g0528900 Oryza sativa ssp. japonica
Peaxi162Scf00251g01010 Petunia axillaris
Peaxi162Scf00581g00021 Petunia axillaris
PGR042G0357 Punica granatum
PGSC0003DMG400005324 Solanum tuberosum
PGSC0003DMG400041709 Solanum tuberosum
Phvul.008G150700 Phaseolus vulgaris
Potri.012G017300 Populus trichocarpa
Potri.012G121228 Populus trichocarpa
Pp3c9_14000 Physcomitrium patens
Prupe.2G313400 Prunus persica
Psat7g227360 Pisum sativum
PSO421G0063 Papaver somniferum
PSO675G7727 Papaver somniferum
QL09p007976 Quercus lobata
QL09p008105 Quercus lobata
RcHm_v2.0_Chr1g0381511 Rosa chinensis
Rhsim03G0210600 Rhododendron simsii
Sc02g0003260 Simmondsia chinensis
Sc20g0002940 Simmondsia chinensis
Sed0013694 Sechium edule
Sed0020778 Sechium edule
SEGI_07593 Sequoiadendron giganteum
SGA_v2.0_scaffold55G19785 Striga asiatica
SHI02356 Sapria himalayana
SMO334G0054 Selaginella moellendorffii
Solyc05g032880.3 Solanum lycopersicum
Sopen05g023270 Solanum pennellii
Sp6g15240 Schrenkiella parvula
TAR374G1406 Trochodendron aralioides
THA.LOC104811989 Tarenaya hassleriana
Thecc.10G105800 Theobroma cacao
Thhalv10014627m.g Eutrema salsugineum
TPR.G34143 Trifolium pratense
TWI39G0072 Tripterygium wilfordii
vmacro06395 Vaccinium macrocarpon
VMungo1383G0294 Vigna mungo
Zm00001eb089870 Zea mays
Zm00001eb199670 Zea mays
Zm00001eb397120 Zea mays

User provided reference genes

Program Settings