Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p14760 Brassica napus
Aa31LG2G1320 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.5454 Anthoceros agrestis
Actinidia27330 Actinidia chinensis
Ah.12g052360 Amaranthus hybridus
AL2G10520 Arabidopsis lyrata
Aqoxy5G04165 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.B1IHLW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.J0IMEJ Arachis hypogaea
AT1G64350 Arabidopsis thaliana
ATR0589G038 Amborella trichopoda
ATR0589G095 Amborella trichopoda
Atru.chr9.2024 Acer truncatum
Atru.chr9.2034 Acer truncatum
AUR62010819 Chenopodium quinoa
AUR62019818 Chenopodium quinoa
BcaB07g31457 Brassica carinata
BcaC04g22562 Brassica carinata
BolC2t11043H Brassica oleracea
BolC9t54684H Brassica oleracea
BraA09t37122Z Brassica rapa
C09p17870 Brassica napus
CANSAT21G1278 Cannabis sativa
CARHR046620 Cardamine hirsuta
Carub.0002s0044 Capsella rubella
Ca_20295_v3 Cicer arietinum L.
CBR_g26176 Chara braunii
Cc08_g15880 Coffea canephora
CDE02G0379 Ceratophyllum demersum
CDE08G0252 Ceratophyllum demersum
Cfa012815 Carpinus fangiana
Ciclev10021146m.g Citrus clementina
CiPaw.12G084500 Carya illinoinensis
ClCG07G014940 Citrullus lanatus
COL.COLO4_10665 Corchorus olitorius
COL.COLO4_15392 Corchorus olitorius
Cpa.g.sc79.62 Carica papaya
Cre03.g192000 Chlamydomonas reinhardtii
CsaV3_4G006470 Cucumis sativus L.
CSS0021201 Camellia sinensis var. sinensis
CSS0021291 Camellia sinensis var. sinensis
CSS0028893 Camellia sinensis var. sinensis
DCAR_027714 Daucus carota
Dinv14019 Davidia involucrata
Dinv38851 Davidia involucrata
Duzib205G1998 Durio zibethinus
ECA240G2034 Erigeron canadensis
EL10Ac5g12895 Beta vulgaris
Eucgr.D01715 Eucalyptus grandis
FAN04G0732 Fragaria x ananassa
FAN08G1599 Fragaria x ananassa
FAN13G2918 Fragaria x ananassa
FAN18G1945 Fragaria x ananassa
FAN18G4151 Fragaria x ananassa
FvH4_5g04211 Fragaria vesca
Glyma.01G224700 Glycine max
Glyma.11G018300 Glycine max
Gohir.A12G235200 Gossypium hirsutum
Gohir.D12G236400 Gossypium hirsutum
Gorai.008G253100 Gossypium raimondii
GSVIVG01019509001 Vitis vinifera
HanXRQChr03g0066311 Helianthus annuus
HanXRQChr03g0085181 Helianthus annuus
HanXRQChr11g0348461 Helianthus annuus
Haze_08644 Corylus avellana
Hma1.2p1_0952F.1_g241000 Hydrangea macrophylla
HPP92_004677 Vanilla planifolia
Hund07659 Selenicereus undatus
Hund08759 Selenicereus undatus
Hund10261 Selenicereus undatus
Hund14232 Selenicereus undatus
Lalb_Chr05g0211611 Lupinus albus
Lj8A209T47 Lonicera japonica
Lj8C194T1 Lonicera japonica
LjContig00312_ERROPOS870357g0017789 Lotus japonicus
Lsat_1_v5_gn_6_84320 Lactuca sativa
Manes.02G011800 Manihot esculenta
Mapoly0117s0010 Marchantia polymorpha
MBI01_g05788_MAGBIO Magnolia biondii
MBI01_g28590_MAGBIO Magnolia biondii
MBI02_g16314_MAGBIO Magnolia biondii
MBI06_g35286_MAGBIO Magnolia biondii
MBI18_g43239_MAGBIO Magnolia biondii
MCO05G347 Micromonas commoda
MD06G1103700 Malus domestica
MD06G1116200 Malus domestica
MD14G1122800 Malus domestica
MD14G1133100 Malus domestica
MD15G1317600 Malus domestica
MD17G1262800 Malus domestica
Medtr6g072020 Medicago truncatula
MELO3C016280.2 Cucumis melo
Migut.A00673 Erythranthe guttata
MSTRG.11934 Avicennia marina
Nitab4.5_0000223g0310 Nicotiana tabacum
Nitab4.5_0007099g0010 Nicotiana tabacum
Nn1g01825 Nelumbo nucifera
Nn3g19065 Nelumbo nucifera
Os01g0620100 Oryza sativa ssp. japonica
Peaxi162Scf00074g01141 Petunia axillaris
PGR031G3352 Punica granatum
PGSC0003DMG400012295 Solanum tuberosum
Phvul.002G163300 Phaseolus vulgaris
Potri.003G138300 Populus trichocarpa
Pp3c5_28960 Physcomitrium patens
Prupe.5G116300 Prunus persica
Psat1g124400 Pisum sativum
PSO135G0479 Papaver somniferum
PSO384G5109 Papaver somniferum
RcHm_v2.0_Chr7g0195271 Rosa chinensis
Rhsim03G0018500 Rhododendron simsii
Rhsim07G0083300 Rhododendron simsii
Rhsim10G0047100 Rhododendron simsii
Rhsim10G0147400 Rhododendron simsii
Rhsim12G0186300 Rhododendron simsii
Sabra03G0099600 Salix brachista
SalBow1G3663 Salvia bowleyana
SalBow1G7588 Salvia bowleyana
Sc01g0010180 Simmondsia chinensis
Sed0003958 Sechium edule
SEGI_13107 Sequoiadendron giganteum
SGA_v2.0_scaffold305G47940 Striga asiatica
SMO147G0195 Selaginella moellendorffii
Solyc08g082100.3 Solanum lycopersicum
Sopen08g030390 Solanum pennellii
Sp2g00410 Schrenkiella parvula
TAR307G0004 Trochodendron aralioides
TAR375G1085 Trochodendron aralioides
THA.LOC104823610 Tarenaya hassleriana
Thecc.02G199200 Theobroma cacao
Thecc.02G222700 Theobroma cacao
Thecc.03G165000 Theobroma cacao
Thecc.03G294500 Theobroma cacao
Thhalv10023589m.g Eutrema salsugineum
Thhalv10023957m.g Eutrema salsugineum
TPR.G25299 Trifolium pratense
TPR.G25301 Trifolium pratense
TPR.G31703 Trifolium pratense
TWI60G1723 Tripterygium wilfordii
unitig_899.g15005 Utricularia gibba
vmacro13906 Vaccinium macrocarpon
VMungo1215G3249 Vigna mungo
Zm00001eb159590 Zea mays

User provided reference genes

Program Settings