Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p16200 Brassica napus
A07p16030 Brassica napus
Aa31LG4G6030 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2037 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.3393 Anthoceros agrestis
Actinidia37940 Actinidia chinensis
Ah.01g021000 Amaranthus hybridus
AL1G32870 Arabidopsis lyrata
AL5G14600 Arabidopsis lyrata
Aqoxy2G01931 Aquilegia oxysepala
Aqoxy6G02286 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.46RTPJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BQ9Q0E Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GU7A1M Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TKX6L5 Arachis hypogaea
AT1G20065 Arabidopsis thaliana
AT3G25940 Arabidopsis thaliana
ATR0057G015 Amborella trichopoda
Atru.chr1.3654 Acer truncatum
AUR62040557 Chenopodium quinoa
AUR62041475 Chenopodium quinoa
BcaB03g14336 Brassica carinata
BcaB03g14344 Brassica carinata
BcaB07g32021 Brassica carinata
BcaC05g25900 Brassica carinata
BcaC05g25904 Brassica carinata
BolC5t30566H Brassica oleracea
BolC7t42872H Brassica oleracea
BraA06t24725Z Brassica rapa
BraA07t29331Z Brassica rapa
C05p18550 Brassica napus
C07p23400 Brassica napus
CAN.G727.4 Capsicum annuum
CANSAT11G0916 Cannabis sativa
CARHR020540 Cardamine hirsuta
CARHR146930 Cardamine hirsuta
Carub.0005s0380 Capsella rubella
Ca_00384_v3 Cicer arietinum L.
Ca_15982_v3 Cicer arietinum L.
CBR_g23850 Chara braunii
Cc10_g01450 Coffea canephora
CDE09G0329 Ceratophyllum demersum
CDE11G0347 Ceratophyllum demersum
Cfa012889 Carpinus fangiana
Ciclev10003775m.g Citrus clementina
CiPaw.07G147200 Carya illinoinensis
ClCG08G014170 Citrullus lanatus
ClCG08G014180 Citrullus lanatus
COL.COLO4_26123 Corchorus olitorius
Cpa.g.sc58.102 Carica papaya
Cre01.g018000 Chlamydomonas reinhardtii
CsaV3_2G024260 Cucumis sativus L.
CSS0004439 Camellia sinensis var. sinensis
CSS0038486 Camellia sinensis var. sinensis
DCAR_015742 Daucus carota
Dinv40488 Davidia involucrata
Duzib093G1099 Durio zibethinus
ECA238G0944 Erigeron canadensis
ECA238G1857 Erigeron canadensis
EL10Ac1g02165 Beta vulgaris
Eucgr.C01258 Eucalyptus grandis
Eucgr.F02832 Eucalyptus grandis
Eucgr.H00960 Eucalyptus grandis
Eucgr.L01842 Eucalyptus grandis
FAN23G3095 Fragaria x ananassa
FAN26G0870 Fragaria x ananassa
FvH4_1g24780 Fragaria vesca
Glyma.03G178900 Glycine max
Glyma.06G213500 Glycine max
Glyma.08G246200 Glycine max
Glyma.08G301902 Glycine max
Glyma.11G172400 Glycine max
Glyma.17G201200 Glycine max
Glyma.19G179600 Glycine max
Glyma.20G021400 Glycine max
Gohir.A06G002600 Gossypium hirsutum
Gohir.D06G005600 Gossypium hirsutum
Gorai.010G002800 Gossypium raimondii
GSVIVG01009945001 Vitis vinifera
HanXRQChr04g0101211 Helianthus annuus
Haze_17776 Corylus avellana
Haze_22662 Corylus avellana
Hma1.2p1_0733F.1_g210170 Hydrangea macrophylla
HPP92_028162 Vanilla planifolia
Hund09202 Selenicereus undatus
Lalb_Chr11g0067001 Lupinus albus
Lj1g0018211 Lotus japonicus
Lj4A21T59 Lonicera japonica
Lsat_1_v5_gn_2_14120 Lactuca sativa
Lsat_1_v5_gn_2_14240 Lactuca sativa
Manes.14G063600 Manihot esculenta
Mapoly0043s0107 Marchantia polymorpha
MCO15G369 Micromonas commoda
MD08G1010500 Malus domestica
MD15G1010600 Malus domestica
Medtr3g102420 Medicago truncatula
MELO3C011355.2 Cucumis melo
Migut.N03173 Erythranthe guttata
MSTRG.22344 Avicennia marina
Nitab4.5_0000337g0010 Nicotiana tabacum
Nitab4.5_0003251g0060 Nicotiana tabacum
Nn3g19859 Nelumbo nucifera
Os03g0711700 Oryza sativa ssp. japonica
Peaxi162Scf00553g00216 Petunia axillaris
PGR031G0142 Punica granatum
PGSC0003DMG400022038 Solanum tuberosum
Phvul.001G175600 Phaseolus vulgaris
Potri.013G015000 Populus trichocarpa
Pp3c24_7070 Physcomitrium patens
Prupe.6G147400 Prunus persica
Psat5g045240 Pisum sativum
PSO541G4324 Papaver somniferum
PSO675G5410 Papaver somniferum
QL01p031168 Quercus lobata
RcHm_v2.0_Chr2g0124111 Rosa chinensis
Rhsim07G0250400 Rhododendron simsii
Sabra13G0012900 Salix brachista
Sabra13G0016900 Salix brachista
SalBow8G1113 Salvia bowleyana
Sc15g0004820 Simmondsia chinensis
Sed0007604 Sechium edule
SEGI_04309 Sequoiadendron giganteum
SEGI_40975 Sequoiadendron giganteum
SGA_v2.0_scaffold19G08553 Striga asiatica
SGA_v2.0_scaffold47G17500 Striga asiatica
SHI17132 Sapria himalayana
SMO351G0141 Selaginella moellendorffii
Solyc04g054510.4 Solanum lycopersicum
Sopen04g024330 Solanum pennellii
Sp1g17830 Schrenkiella parvula
TAR622G0958 Trochodendron aralioides
THA.LOC104811420 Tarenaya hassleriana
THA.LOC104825467 Tarenaya hassleriana
THA.LOC104825468 Tarenaya hassleriana
THA.LOC109116732 Tarenaya hassleriana
Thecc.08G047200 Theobroma cacao
Thhalv10009132m.g Eutrema salsugineum
Thhalv10019327m.g Eutrema salsugineum
TPR.G9182 Trifolium pratense
TWI56G1449 Tripterygium wilfordii
unitig_22.g6797 Utricularia gibba
vmacro04368 Vaccinium macrocarpon
VMungo1080G1160 Vigna mungo
Zm00001eb054840 Zea mays

User provided reference genes

Program Settings