Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p22300 Brassica napus
A09p47830 Brassica napus
Aa31sc43G80 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.689 Anthoceros agrestis
Actinidia38271 Actinidia chinensis
Ah.07g198900 Amaranthus hybridus
AL5G36000 Arabidopsis lyrata
Aqoxy3G02774 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.BTM1YE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NKTC04 Arachis hypogaea
AT3G54890 Arabidopsis thaliana
ATR0115G020 Amborella trichopoda
Atru.chr12.735 Acer truncatum
AUR62018252 Chenopodium quinoa
AUR62037752 Chenopodium quinoa
BcaB01g00149 Brassica carinata
BcaB02g07715 Brassica carinata
BcaC07g39769 Brassica carinata
BcaC08g44705 Brassica carinata
BolC6t37426H Brassica oleracea
BolC8t50617H Brassica oleracea
BraA07t29908Z Brassica rapa
BraA09t40240Z Brassica rapa
C06p22390 Brassica napus
C08p30080 Brassica napus
CAN.G694.80 Capsicum annuum
CAN.G694.82 Capsicum annuum
CANSAT56G3755 Cannabis sativa
CARHR164870 Cardamine hirsuta
Carub.0005s2150 Capsella rubella
Ca_16583_v3 Cicer arietinum L.
CBR_g50349 Chara braunii
Cc09_g02010 Coffea canephora
CDE02G2431 Ceratophyllum demersum
CDE02G3298 Ceratophyllum demersum
CDE05G0118 Ceratophyllum demersum
Cfa001615 Carpinus fangiana
Ciclev10032568m.g Citrus clementina
CiPaw.01G273800 Carya illinoinensis
CiPaw.02G174600 Carya illinoinensis
ClCG09G020650 Citrullus lanatus
COL.COLO4_23700 Corchorus olitorius
Cpa.g.sc53.66 Carica papaya
Cre06.g283050 Chlamydomonas reinhardtii
CsaV3_5G025740 Cucumis sativus L.
CSS0009362 Camellia sinensis var. sinensis
DCAR_015311 Daucus carota
DCAR_019117 Daucus carota
Dinv11785 Davidia involucrata
Dinv31332 Davidia involucrata
Duzib114G0164 Durio zibethinus
ECA233G2504 Erigeron canadensis
Eucgr.J01096 Eucalyptus grandis
FAN01G3166 Fragaria x ananassa
FAN03G2271 Fragaria x ananassa
FAN06G3680 Fragaria x ananassa
FAN10G1563 Fragaria x ananassa
FvH4_7g19750 Fragaria vesca
Glyma.02G064700 Glycine max
Glyma.16G145800 Glycine max
Gohir.A05G087400 Gossypium hirsutum
Gohir.A13G024300 Gossypium hirsutum
Gohir.D05G088400 Gossypium hirsutum
Gohir.D13G023200 Gossypium hirsutum
Gorai.009G090600 Gossypium raimondii
Gorai.013G026000 Gossypium raimondii
GSVIVG01016295001 Vitis vinifera
HanXRQChr08g0219051 Helianthus annuus
HanXRQChr12g0370841 Helianthus annuus
Haze_16904 Corylus avellana
Hma1.2p1_0268F.1_g107600 Hydrangea macrophylla
Hma1.2p1_1706F.1_g298440 Hydrangea macrophylla
HPP92_008971 Vanilla planifolia
Hund12048 Selenicereus undatus
Lalb_Chr01g0010071 Lupinus albus
Lalb_Chr01g0010081 Lupinus albus
Lalb_Chr01g0010091 Lupinus albus
Lalb_Chr19g0129641 Lupinus albus
Lj1A916T23 Lonicera japonica
Lj2g0014864 Lotus japonicus
Lsat_1_v5_gn_8_19860 Lactuca sativa
Manes.07G104600 Manihot esculenta
Manes.10G044900 Manihot esculenta
Mapoly0082s0040 Marchantia polymorpha
MBI07_g32450_MAGBIO Magnolia biondii
MBI07_g43743_MAGBIO Magnolia biondii
MCO01G670 Micromonas commoda
MD07G1175900 Malus domestica
Medtr6g033320 Medicago truncatula
MELO3C004214.2 Cucumis melo
Migut.F01771 Erythranthe guttata
MSTRG.27458 Avicennia marina
Nitab4.5_0000233g0050 Nicotiana tabacum
Nitab4.5_0000476g0110 Nicotiana tabacum
Nitab4.5_0001448g0030 Nicotiana tabacum
Nitab4.5_0012109g0010 Nicotiana tabacum
Nn2g13079 Nelumbo nucifera
Oeu014392.1 Olea europaea
Os06g0320500 Oryza sativa ssp. japonica
Peaxi162Scf00156g00139 Petunia axillaris
Peaxi162Scf00747g00310 Petunia axillaris
PGR044G2309 Punica granatum
PGSC0003DMG400023344 Solanum tuberosum
PGSC0003DMG400023461 Solanum tuberosum
Phvul.004G071500 Phaseolus vulgaris
Potri.008G041000 Populus trichocarpa
Potri.010G221100 Populus trichocarpa
Pp3c13_14980 Physcomitrium patens
Pp3c3_12510 Physcomitrium patens
Pp3c4_29150 Physcomitrium patens
Pp3c4_29270 Physcomitrium patens
PRCOL_00000621 Prasinoderma coloniale
PRCOL_00002443 Prasinoderma coloniale
Prupe.8G142700 Prunus persica
Psat1g097880 Pisum sativum
PSO339G0265 Papaver somniferum
PSO384G1662 Papaver somniferum
QL08p056296 Quercus lobata
RcHm_v2.0_Chr1g0363641 Rosa chinensis
Rhsim09G0152700 Rhododendron simsii
Sabra10G0170800 Salix brachista
SalBow4G0840 Salvia bowleyana
Sc18g0002980 Simmondsia chinensis
Sed0005093 Sechium edule
SEGI_13520 Sequoiadendron giganteum
SGA_v2.0_scaffold62G21420 Striga asiatica
SMO275G0051 Selaginella moellendorffii
Solyc05g056050.3 Solanum lycopersicum
Sopen05g034460 Solanum pennellii
Sopen05g034480 Solanum pennellii
Sp5g07540 Schrenkiella parvula
TAR623G1639 Trochodendron aralioides
TAR636G1102 Trochodendron aralioides
THA.LOC104824586 Tarenaya hassleriana
Thecc.10G071700 Theobroma cacao
Thhalv10010669m.g Eutrema salsugineum
TPR.G36707 Trifolium pratense
TWI63G0905 Tripterygium wilfordii
unitig_46.g18592 Utricularia gibba
unitig_749.g14171 Utricularia gibba
vmacro04877 Vaccinium macrocarpon
VMungo0464G0911 Vigna mungo
VMungo0647G1829 Vigna mungo
Zm00001eb207130 Zea mays
Zm00001eb233170 Zea mays

User provided reference genes

Program Settings