Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p06550 Brassica napus
A08p34320 Brassica napus
Aa31LG1G5090 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.1734 Anthoceros agrestis
Actinidia38994 Actinidia chinensis
Ah.08g220180 Amaranthus hybridus
AL1G20430 Arabidopsis lyrata
Aqoxy1G01816 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0Q8MRK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.3IC4JN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DWF5LU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FF9LB7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LT2KYF Arachis hypogaea
AT1G09830 Arabidopsis thaliana
ATR0598G043 Amborella trichopoda
Atru.chr1.4075 Acer truncatum
Atru.chr9.317 Acer truncatum
AUR62001730 Chenopodium quinoa
AUR62020045 Chenopodium quinoa
BcaB03g13541 Brassica carinata
BcaC05g24841 Brassica carinata
BcaC07g38528 Brassica carinata
BolC5t29546H Brassica oleracea
BolC8t48951H Brassica oleracea
BraA06t23866Z Brassica rapa
BraA08t35343Z Brassica rapa
C05p07940 Brassica napus
C08p13210 Brassica napus
CAN.G855.13 Capsicum annuum
CANSAT54G1032 Cannabis sativa
CARHR009850 Cardamine hirsuta
Carub.0001s0921 Capsella rubella
Ca_04891_v3 Cicer arietinum L.
Ca_12589_v3 Cicer arietinum L.
CBR_g36226 Chara braunii
Cc02_g23270 Coffea canephora
CDE02G0137 Ceratophyllum demersum
CDE04G1010 Ceratophyllum demersum
Cfa004480 Carpinus fangiana
Cfa022594 Carpinus fangiana
Cfa023437 Carpinus fangiana
Ciclev10000877m.g Citrus clementina
CiPaw.06G174600 Carya illinoinensis
ClCG10G007320 Citrullus lanatus
COL.COLO4_17713 Corchorus olitorius
Cpa.g.sc113.32 Carica papaya
Cre09.g404903 Chlamydomonas reinhardtii
Cre18.g749497 Chlamydomonas reinhardtii
Cre18.g749647 Chlamydomonas reinhardtii
CsaV3_3G006560 Cucumis sativus L.
CSS0010237 Camellia sinensis var. sinensis
CSS0011192 Camellia sinensis var. sinensis
CSS0022082 Camellia sinensis var. sinensis
CSS0025059 Camellia sinensis var. sinensis
CSS0038090 Camellia sinensis var. sinensis
CSS0048615 Camellia sinensis var. sinensis
DCAR_006665 Daucus carota
Dinv19422 Davidia involucrata
Dinv29601 Davidia involucrata
Duzib052G0127 Durio zibethinus
Duzib132G0946 Durio zibethinus
ECA236G4964 Erigeron canadensis
EL10Ac7g16076 Beta vulgaris
Eucgr.I02773 Eucalyptus grandis
Eucgr.I02775 Eucalyptus grandis
FAN03G2436 Fragaria x ananassa
FAN10G1818 Fragaria x ananassa
FAN10G2816 Fragaria x ananassa
Glyma.10G156900 Glycine max
Gohir.A01G185000 Gossypium hirsutum
Gohir.A12G043800 Gossypium hirsutum
Gohir.D01G176200 Gossypium hirsutum
Gohir.D12G043400 Gossypium hirsutum
Gorai.002G218200 Gossypium raimondii
Gorai.008G045600 Gossypium raimondii
GSVIVG01038784001 Vitis vinifera
HanXRQChr06g0176431 Helianthus annuus
HanXRQChr11g0329691 Helianthus annuus
Haze_10037 Corylus avellana
HPP92_001871 Vanilla planifolia
HPP92_026669 Vanilla planifolia
Hund18885 Selenicereus undatus
Hund18887 Selenicereus undatus
Lalb_Chr21g0311651 Lupinus albus
Lj5C267T12 Lonicera japonica
Lj5g0022297 Lotus japonicus
Lsat_1_v5_gn_7_76800 Lactuca sativa
Manes.07G025100 Manihot esculenta
Mapoly0041s0149 Marchantia polymorpha
MBI06_g06706_MAGBIO Magnolia biondii
MCO16G439 Micromonas commoda
MD08G1243400 Malus domestica
MD15G1437700 Malus domestica
Medtr5g025310 Medicago truncatula
MELO3C016483.2 Cucumis melo
Migut.N00845 Erythranthe guttata
MSTRG.5204 Avicennia marina
Nitab4.5_0001773g0060 Nicotiana tabacum
Nitab4.5_0002347g0020 Nicotiana tabacum
Nitab4.5_0003281g0060 Nicotiana tabacum
Nitab4.5_0003816g0050 Nicotiana tabacum
Nitab4.5_0003893g0040 Nicotiana tabacum
Nitab4.5_0003893g0060 Nicotiana tabacum
Nn5g27502 Nelumbo nucifera
Oeu030849.1 Olea europaea
Os08g0191200 Oryza sativa ssp. japonica
Os12g0197100 Oryza sativa ssp. japonica
Peaxi162Scf00011g01426 Petunia axillaris
PGR142G3566 Punica granatum
PGSC0003DMG400024886 Solanum tuberosum
Phvul.007G182100 Phaseolus vulgaris
Potri.004G225500 Populus trichocarpa
Pp3c19_9430 Physcomitrium patens
Pp3c22_7830 Physcomitrium patens
Pp3s32_121 Physcomitrium patens
PRCOL_00005058 Prasinoderma coloniale
Prupe.1G580800 Prunus persica
Psat2g146560 Pisum sativum
PSO170G5315 Papaver somniferum
PSO782G2965 Papaver somniferum
QL02p100861 Quercus lobata
Rhsim07G0227600 Rhododendron simsii
Rhsim07G0227800 Rhododendron simsii
Rhsim11G0122100 Rhododendron simsii
Sabra01G0171200 Salix brachista
Sabra03G0003100 Salix brachista
SalBow4G1817 Salvia bowleyana
SalBow8G2098 Salvia bowleyana
Sc17g0003920 Simmondsia chinensis
Sed0019412 Sechium edule
SEGI_14806 Sequoiadendron giganteum
SGA_v2.0_scaffold42G15899 Striga asiatica
SMO358G0426 Selaginella moellendorffii
Solyc01g103440.3 Solanum lycopersicum
Sopen01g045790 Solanum pennellii
Sp1g08460 Schrenkiella parvula
TAR381G1040 Trochodendron aralioides
THA.LOC104816783 Tarenaya hassleriana
THA.LOC104816816 Tarenaya hassleriana
Thecc.02G017200 Theobroma cacao
Thhalv10007333m.g Eutrema salsugineum
TPR.G5252 Trifolium pratense
TWI15G1214 Tripterygium wilfordii
unitig_8.g3587 Utricularia gibba
unitig_8.g3588 Utricularia gibba
vmacro01708 Vaccinium macrocarpon
VMungo0720G1793 Vigna mungo
Zm00001eb294330 Zea mays
Zm00001eb342350 Zea mays

User provided reference genes

Program Settings