Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p12730 Brassica napus
A10p15010 Brassica napus
Aa31LG3G13440 Aethionema arabicum
Actinidia04131 Actinidia chinensis
Ah.09g229770 Amaranthus hybridus
AL8G33620 Arabidopsis lyrata
Aqoxy7G03117 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.6YA4AW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JGW43E Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MG2J04 Arachis hypogaea
AT5G57590 Arabidopsis thaliana
ATR0580G146 Amborella trichopoda
Atru.chr7.720 Acer truncatum
AUR62040000 Chenopodium quinoa
AUR62040306 Chenopodium quinoa
BcaB01g04449 Brassica carinata
BcaB08g36111 Brassica carinata
BcaC01g06481 Brassica carinata
BcaC03g16218 Brassica carinata
BcaC04g19951 Brassica carinata
BcaC05g25358 Brassica carinata
BcaC05g28220 Brassica carinata
BcaC08g43477 Brassica carinata
BolC1t03728H Brassica oleracea
BolC2t10024H Brassica oleracea
BolC2t10025H Brassica oleracea
BolC3t13934H Brassica oleracea
BolC5t33030H Brassica oleracea
BolC5t33031H Brassica oleracea
BolC9t57799H Brassica oleracea
BraA02t08063Z Brassica rapa
BraA03t10584Z Brassica rapa
BraA10t43578Z Brassica rapa
C01p37640 Brassica napus
C03p14920 Brassica napus
C05p43000 Brassica napus
C06p08630 Brassica napus
C09p49460 Brassica napus
C09p62180 Brassica napus
CAN.G584.9 Capsicum annuum
CANSAT11G2131 Cannabis sativa
CARHR271360 Cardamine hirsuta
Carub.0008s1810 Capsella rubella
Ca_21207_v3 Cicer arietinum L.
CBR_g30689 Chara braunii
Cc06_g13470 Coffea canephora
Cc06_g13480 Coffea canephora
CDE02G3177 Ceratophyllum demersum
Cfa013519 Carpinus fangiana
Cfa016931 Carpinus fangiana
Cfa024735 Carpinus fangiana
Ciclev10007423m.g Citrus clementina
CiPaw.07G190100 Carya illinoinensis
ClCG06G013170 Citrullus lanatus
Cpa.g.sc95.64 Carica papaya
Cre06.g277200 Chlamydomonas reinhardtii
CsaV3_1G031330 Cucumis sativus L.
CSS0002850 Camellia sinensis var. sinensis
CSS0003956 Camellia sinensis var. sinensis
CSS0007035 Camellia sinensis var. sinensis
CSS0028890 Camellia sinensis var. sinensis
CSS0028993 Camellia sinensis var. sinensis
CSS0029448 Camellia sinensis var. sinensis
CSS0049760 Camellia sinensis var. sinensis
DCAR_009913 Daucus carota
Dinv41268 Davidia involucrata
Duzib150G0339 Durio zibethinus
ECA240G1428 Erigeron canadensis
EL10Ac8g18271 Beta vulgaris
Eucgr.C00186 Eucalyptus grandis
FAN17G3079 Fragaria x ananassa
FAN22G2400 Fragaria x ananassa
FvH4_4g09130 Fragaria vesca
Glyma.13G094700 Glycine max
Gohir.A13G211900 Gossypium hirsutum
Gohir.D13G216000 Gossypium hirsutum
Gorai.013G246300 Gossypium raimondii
GSVIVG01029151001 Vitis vinifera
HanXRQChr03g0068921 Helianthus annuus
Haze_22118 Corylus avellana
Haze_22119 Corylus avellana
Hma1.2p1_0863F.1_g230000 Hydrangea macrophylla
Hma1.2p1_1022F.1_g248750 Hydrangea macrophylla
Hma1.2p1_1022F.1_g248760 Hydrangea macrophylla
Hma1.2p1_1423F.1_g282650 Hydrangea macrophylla
Hma1.2p1_1423F.1_g282660 Hydrangea macrophylla
HPP92_013429 Vanilla planifolia
Hund09018 Selenicereus undatus
Lalb_Chr07g0180301 Lupinus albus
Lj4g0011507 Lotus japonicus
Lj9A687T82 Lonicera japonica
Lsat_1_v5_gn_7_54301 Lactuca sativa
Manes.06G023800 Manihot esculenta
Mapoly0061s0099 Marchantia polymorpha
MBI14_g17347_MAGBIO Magnolia biondii
MCO16G292 Micromonas commoda
MD13G1267300 Malus domestica
Medtr4g128620 Medicago truncatula
MELO3C017490.2 Cucumis melo
MELO3C020066.2 Cucumis melo
MELO3C027570.2 Cucumis melo
MELO3C031202.2 Cucumis melo
MELO3C032402.2 Cucumis melo
MELO3C033059.2 Cucumis melo
MELO3C033088.2 Cucumis melo
MELO3C034648.2 Cucumis melo
Migut.J01457 Erythranthe guttata
MSTRG.19696 Avicennia marina
Nitab4.5_0000244g0320 Nicotiana tabacum
Nitab4.5_0000937g0040 Nicotiana tabacum
Nn8g40500 Nelumbo nucifera
Oeu009845.1 Olea europaea
Os08g0245400 Oryza sativa ssp. japonica
Peaxi162Scf00050g00628 Petunia axillaris
Peaxi162Scf00610g00360 Petunia axillaris
PGR142G2544 Punica granatum
Phvul.003G147900 Phaseolus vulgaris
Potri.006G170400 Populus trichocarpa
Pp3c17_24020 Physcomitrium patens
Prupe.1G089300 Prunus persica
Psat4g011120 Pisum sativum
PSO063G2401 Papaver somniferum
PSO782G0277 Papaver somniferum
QL02p097286 Quercus lobata
QL02p097337 Quercus lobata
RcHm_v2.0_Chr4g0403051 Rosa chinensis
Rhsim01G0006800 Rhododendron simsii
Sabra06G0131200 Salix brachista
SalBow6G4076 Salvia bowleyana
Sc14g0001190 Simmondsia chinensis
Sed0027913 Sechium edule
SEGI_33461 Sequoiadendron giganteum
SEGI_35821 Sequoiadendron giganteum
SEGI_37083 Sequoiadendron giganteum
SGA_v2.0_scaffold69G23277 Striga asiatica
SHI02942 Sapria himalayana
SMO146G0375 Selaginella moellendorffii
Solyc07g006810.3 Solanum lycopersicum
Sopen07g002910 Solanum pennellii
Sp6g19290 Schrenkiella parvula
TAR625G0692 Trochodendron aralioides
Thecc.09G168600 Theobroma cacao
Thhalv10012677m.g Eutrema salsugineum
TPR.G5323 Trifolium pratense
TWI34G1047 Tripterygium wilfordii
unitig_749.g14164 Utricularia gibba
vmacro13109 Vaccinium macrocarpon
VMungo1215G0493 Vigna mungo
Zm00001eb412500 Zea mays

User provided reference genes

Program Settings