Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p63740 Brassica napus
Aa31LG1G2030 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.2285 Anthoceros agrestis
Actinidia27408 Actinidia chinensis
Ah.12g057600 Amaranthus hybridus
AL1G24110 Arabidopsis lyrata
Aqoxy107s001 Aquilegia oxysepala
Aqoxy54s002 Aquilegia oxysepala
Aqoxy57s001 Aquilegia oxysepala
Aqoxy5G02043 Aquilegia oxysepala
Aqoxy60s002 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.BCQ50G Arachis hypogaea
AT1G12650 Arabidopsis thaliana
ATR0757G162 Amborella trichopoda
Atru.chr12.1358 Acer truncatum
Atru.chr12.1359 Acer truncatum
AUR62010651 Chenopodium quinoa
AUR62017291 Chenopodium quinoa
BcaB03g13174 Brassica carinata
BcaB08g34261 Brassica carinata
BcaC01g02806 Brassica carinata
BcaC07g41688 Brassica carinata
BcaNung00055 Brassica carinata
BolC8t52265H Brassica oleracea
BraA09t41722Z Brassica rapa
C08p15580 Brassica napus
C08p47240 Brassica napus
CAN.G65.155 Capsicum annuum
CARHR012940 Cardamine hirsuta
Carub.0001s1234 Capsella rubella
Ca_05359_v3 Cicer arietinum L.
Ca_24641_v3 Cicer arietinum L.
CBR_g12215 Chara braunii
Cc08_g14020 Coffea canephora
CDE02G4341 Ceratophyllum demersum
Cfa012106 Carpinus fangiana
Cfa023436 Carpinus fangiana
Ciclev10021851m.g Citrus clementina
CiPaw.12G097900 Carya illinoinensis
ClCG08G000800 Citrullus lanatus
Cpa.g.sc53.73 Carica papaya
Cre09.g401663 Chlamydomonas reinhardtii
CsaV3_5G039810 Cucumis sativus L.
CSS0008368 Camellia sinensis var. sinensis
DCAR_008420 Daucus carota
Dinv39007 Davidia involucrata
Duzib068G0251 Durio zibethinus
ECA240G3664 Erigeron canadensis
EL10Ac5g12729 Beta vulgaris
Eucgr.D01919 Eucalyptus grandis
Eucgr.L01965 Eucalyptus grandis
FAN01G2068 Fragaria x ananassa
FAN03G3010 Fragaria x ananassa
FAN06G2073 Fragaria x ananassa
FAN10G1939 Fragaria x ananassa
FAN11G1832 Fragaria x ananassa
FAN11G3948 Fragaria x ananassa
FAN15G1616 Fragaria x ananassa
FvH4_3g24970 Fragaria vesca
FvH4_3g25070 Fragaria vesca
FvH4_7g07500 Fragaria vesca
Glyma.03G021100 Glycine max
Glyma.07G082900 Glycine max
Gohir.A11G021300 Gossypium hirsutum
Gohir.D11G021000 Gossypium hirsutum
Gorai.007G022300 Gossypium raimondii
GSVIVG01019856001 Vitis vinifera
Haze_08945 Corylus avellana
Haze_20475 Corylus avellana
Hma1.2p1_0514F.1_g170070 Hydrangea macrophylla
HPP92_003759 Vanilla planifolia
Hund11528 Selenicereus undatus
Lalb_Chr07g0189581 Lupinus albus
Lalb_Chr12g0208371 Lupinus albus
Lalb_Chr12g0208451 Lupinus albus
Lj3g0000848 Lotus japonicus
Lsat_1_v5_gn_6_87641 Lactuca sativa
Manes.01G066700 Manihot esculenta
Mapoly0004s0034 Marchantia polymorpha
MBI04_g02075_MAGBIO Magnolia biondii
MBI11_g12655_MAGBIO Magnolia biondii
MBI11_g31491_MAGBIO Magnolia biondii
MBI11_g32389_MAGBIO Magnolia biondii
MBI11_g40802_MAGBIO Magnolia biondii
MBI11_g41124_MAGBIO Magnolia biondii
MBI11_g41127_MAGBIO Magnolia biondii
MBI11_g47761_MAGBIO Magnolia biondii
MBI11_g47763_MAGBIO Magnolia biondii
MD03G1146200 Malus domestica
MD11G1165500 Malus domestica
Medtr5g058150 Medicago truncatula
Medtr6g075250 Medicago truncatula
MELO3C019927.2 Cucumis melo
Migut.E01294 Erythranthe guttata
MSTRG.1893 Avicennia marina
Nitab4.5_0001586g0220 Nicotiana tabacum
Nitab4.5_0002553g0040 Nicotiana tabacum
Nitab4.5_0003113g0020 Nicotiana tabacum
Nitab4.5_0003994g0020 Nicotiana tabacum
Nn6g34244 Nelumbo nucifera
Oeu011662.1 Olea europaea
Os09g0525200 Oryza sativa ssp. japonica
Peaxi162Scf01294g00034 Petunia axillaris
PGR031G1609 Punica granatum
PGSC0003DMG400026921 Solanum tuberosum
Phvul.009G080900 Phaseolus vulgaris
Phvul.009G247000 Phaseolus vulgaris
Phvul.010G049100 Phaseolus vulgaris
Potri.001G110000 Populus trichocarpa
Pp3c15_19260 Physcomitrium patens
PRCOL_00004135 Prasinoderma coloniale
Prupe.6G131000 Prunus persica
Prupe.8G125000 Prunus persica
Psat0s646g0120 Pisum sativum
PSO478G4928 Papaver somniferum
PSO782G2900 Papaver somniferum
QL02p071798 Quercus lobata
QL12p017317 Quercus lobata
RcHm_v2.0_Chr5g0045251 Rosa chinensis
Rhsim07G0094600 Rhododendron simsii
Sabra01G0083200 Salix brachista
SalBow7G2511 Salvia bowleyana
Sc22g0000230 Simmondsia chinensis
Sed0017231 Sechium edule
SEGI_09748 Sequoiadendron giganteum
SEGI_22925 Sequoiadendron giganteum
SGA_v2.0_scaffold196G40881 Striga asiatica
SMO228G0196 Selaginella moellendorffii
Solyc06g073120.4 Solanum lycopersicum
Sopen06g029470 Solanum pennellii
Sp1g11240 Schrenkiella parvula
TAR636G1581 Trochodendron aralioides
THA.LOC104823571 Tarenaya hassleriana
Thecc.03G271700 Theobroma cacao
Thhalv10008688m.g Eutrema salsugineum
TPR.G27805 Trifolium pratense
TWI60G0876 Tripterygium wilfordii
TWI81G1011 Tripterygium wilfordii
unitig_899.g14861 Utricularia gibba
vmacro12796 Vaccinium macrocarpon
vmacro13919 Vaccinium macrocarpon
VMungo0331G1538 Vigna mungo
Zm00001eb045710 Zea mays
Zm00001eb103160 Zea mays
Zm00001eb112060 Zea mays
Zm00001eb118520 Zea mays
Zm00001eb199630 Zea mays
Zm00001eb297670 Zea mays
Zm00001eb297680 Zea mays

User provided reference genes

Program Settings