Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p37390 Brassica napus
A05p37420 Brassica napus
Aa31LG3G5560 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.684 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.687 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.688 Anthoceros agrestis
Actinidia01589 Actinidia chinensis
Actinidia22072 Actinidia chinensis
Actinidia22073 Actinidia chinensis
Actinidia27127 Actinidia chinensis
Ah.04g153050 Amaranthus hybridus
AL3G23560 Arabidopsis lyrata
Aqoxy1G00442 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.14IR3Z Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.4PIV4R Arachis hypogaea
AT3G11960 Arabidopsis thaliana
ATR0665G460 Amborella trichopoda
Atru.chr8.1221 Acer truncatum
AUR62015288 Chenopodium quinoa
AUR62026870 Chenopodium quinoa
AUR62032732 Chenopodium quinoa
BcaB04g18703 Brassica carinata
BcaB06g25560 Brassica carinata
BcaC01g04068 Brassica carinata
BcaC05g29309 Brassica carinata
BolC3t16806H Brassica oleracea
BolC5t34266H Brassica oleracea
BraA03t12900Z Brassica rapa
BraA05t22540Z Brassica rapa
C03p45390 Brassica napus
C05p55980 Brassica napus
CAN.G128.57 Capsicum annuum
CANSAT64G1965 Cannabis sativa
CARHR086510 Cardamine hirsuta
Carub.0003s1129 Capsella rubella
Ca_09097_v3 Cicer arietinum L.
CDE05G3662 Ceratophyllum demersum
Cfa020114 Carpinus fangiana
Ciclev10011020m.g Citrus clementina
Ciclev10011630m.g Citrus clementina
CiPaw.09G026200 Carya illinoinensis
ClCG10G017810 Citrullus lanatus
COL.COLO4_29436 Corchorus olitorius
Cpa.g.sc85.17 Carica papaya
Cpa.g.sc85.18 Carica papaya
CsaV3_3G038490 Cucumis sativus L.
CsaV3_7G005520 Cucumis sativus L.
CsaV3_7G005530 Cucumis sativus L.
CSS0022615 Camellia sinensis var. sinensis
CSS0045552 Camellia sinensis var. sinensis
CSS0049837 Camellia sinensis var. sinensis
DCAR_017047 Daucus carota
Dinv25022 Davidia involucrata
Dinv25023 Davidia involucrata
Dinv25024 Davidia involucrata
ECA238G3196 Erigeron canadensis
EL10Ac3g06848 Beta vulgaris
Eucgr.K01882 Eucalyptus grandis
FAN02G2347 Fragaria x ananassa
FAN03G0309 Fragaria x ananassa
FAN03G3238 Fragaria x ananassa
FAN05G1427 Fragaria x ananassa
FAN05G2116 Fragaria x ananassa
FAN05G3467 Fragaria x ananassa
FAN09G2962 Fragaria x ananassa
FAN14G4845 Fragaria x ananassa
FAN14G5853 Fragaria x ananassa
FvH4_4g14010 Fragaria vesca
FvH4_4g14020 Fragaria vesca
FvH4_6g21460 Fragaria vesca
FvH4_6g33521 Fragaria vesca
Glyma.03G206600 Glycine max
Glyma.19G204200 Glycine max
Gohir.A09G130500 Gossypium hirsutum
Gohir.D09G126500 Gossypium hirsutum
Gorai.006G145300 Gossypium raimondii
GSVIVG01033428001 Vitis vinifera
HanXRQChr14g0438891 Helianthus annuus
Haze_20075 Corylus avellana
Haze_20076 Corylus avellana
Hma1.2p1_0516F.1_g170580 Hydrangea macrophylla
HPP92_017552 Vanilla planifolia
Hund19221 Selenicereus undatus
Lalb_Chr25g0287671 Lupinus albus
Lj1A1135G80 Lonicera japonica
Lj1g0016427 Lotus japonicus
Lsat_1_v5_gn_2_58060 Lactuca sativa
Lsat_1_v5_gn_3_12560 Lactuca sativa
Lsat_1_v5_gn_6_720 Lactuca sativa
Manes.08G040000 Manihot esculenta
Mapoly0005s0200 Marchantia polymorpha
MCO03G129 Micromonas commoda
MD14G1049600 Malus domestica
Medtr7g107350 Medicago truncatula
MELO3C009593.2 Cucumis melo
Migut.J01878 Erythranthe guttata
MSTRG.19928 Avicennia marina
Nitab4.5_0001079g0110 Nicotiana tabacum
Nitab4.5_0005684g0020 Nicotiana tabacum
Nn7g35896 Nelumbo nucifera
Oeu046734.3 Olea europaea
Os07g0203700 Oryza sativa ssp. japonica
Peaxi162Scf00249g00811 Petunia axillaris
PGR142G0165 Punica granatum
Phvul.001G200200 Phaseolus vulgaris
Potri.006G197200 Populus trichocarpa
Pp3c24_19520 Physcomitrium patens
Prupe.7G085900 Prunus persica
Psat0s2035g0040 Pisum sativum
Psat1g163960 Pisum sativum
Psat7g139360 Pisum sativum
PSO170G3481 Papaver somniferum
PSO528G0235 Papaver somniferum
QL07p025555 Quercus lobata
QL10p013792 Quercus lobata
RcHm_v2.0_Chr3g0478521 Rosa chinensis
RcHm_v2.0_Chr3g0478641 Rosa chinensis
Rhsim03G0002200 Rhododendron simsii
Rhsim03G0002400 Rhododendron simsii
RhsimUnG0014500 Rhododendron simsii
Sabra06G0151700 Salix brachista
SalBow6G5976 Salvia bowleyana
Sc19g0006260 Simmondsia chinensis
Sed0007842 Sechium edule
SEGI_09849 Sequoiadendron giganteum
SEGI_25187 Sequoiadendron giganteum
SGA_v2.0_scaffold105G30514 Striga asiatica
SGA_v2.0_scaffold130G34336 Striga asiatica
SHI30022 Sapria himalayana
SHI30024 Sapria himalayana
SHI30026 Sapria himalayana
SMO276G0043 Selaginella moellendorffii
Solyc10g080630.2 Solanum lycopersicum
Sopen10g031170 Solanum pennellii
Sp3g10180 Schrenkiella parvula
TAR623G0137 Trochodendron aralioides
THA.LOC104826780 Tarenaya hassleriana
Thecc.05G180400 Theobroma cacao
Thhalv10019900m.g Eutrema salsugineum
TPR.G10577 Trifolium pratense
TPR.G10589 Trifolium pratense
TPR.G32304 Trifolium pratense
TWI74G1245 Tripterygium wilfordii
unitig_0.g509 Utricularia gibba
unitig_0.g510 Utricularia gibba
unitig_0.g511 Utricularia gibba
vmacro12556 Vaccinium macrocarpon
vmacro12557 Vaccinium macrocarpon
VMungo1383G3705 Vigna mungo
Zm00001eb302880 Zea mays

User provided reference genes

Program Settings