Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p48900 Brassica napus
Aa31LG6G16400 Aethionema arabicum
Actinidia00584 Actinidia chinensis
Actinidia00585 Actinidia chinensis
Actinidia20479 Actinidia chinensis
Ah.01g009490 Amaranthus hybridus
Ah.13g066420 Amaranthus hybridus
AL7G10680 Arabidopsis lyrata
Aqoxy5G01775 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.8G8R7R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.B05S7J Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R4GM9V Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T5CB16 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZR7FTB Arachis hypogaea
AT4G38810 Arabidopsis thaliana
ATR0481G015 Amborella trichopoda
Atru.chr5.3204 Acer truncatum
AUR62010113 Chenopodium quinoa
AUR62013108 Chenopodium quinoa
BcaNung01966 Brassica carinata
BolC7t46770H Brassica oleracea
BraA06t27758Z Brassica rapa
C07p63570 Brassica napus
CAN.G588.16 Capsicum annuum
CANSAT25G1906 Cannabis sativa
CARHR247920 Cardamine hirsuta
Carub.0007s0066 Capsella rubella
Ca_15318_v3 Cicer arietinum L.
Ca_18993_v3 Cicer arietinum L.
Cc02_g16650 Coffea canephora
Cc02_g16670 Coffea canephora
CDE02G2774 Ceratophyllum demersum
Cfa005166 Carpinus fangiana
Ciclev10028685m.g Citrus clementina
Ciclev10030375m.g Citrus clementina
CiPaw.05G076100 Carya illinoinensis
CiPaw.06G125800 Carya illinoinensis
ClCG02G004370 Citrullus lanatus
COL.COLO4_17240 Corchorus olitorius
Cpa.g.sc37.205 Carica papaya
CsaV3_7G000740 Cucumis sativus L.
DCAR_026360 Daucus carota
Dinv41981 Davidia involucrata
Duzib052G1250 Durio zibethinus
Duzib132G0429 Durio zibethinus
Duzib248G0603 Durio zibethinus
ECA233G0594 Erigeron canadensis
EL10Ac9g21461 Beta vulgaris
Eucgr.I01368 Eucalyptus grandis
FAN15G1889 Fragaria x ananassa
FAN20G1238 Fragaria x ananassa
FAN24G2027 Fragaria x ananassa
FAN27G2697 Fragaria x ananassa
FvH4_2g02210 Fragaria vesca
Glyma.04G006200 Glycine max
Glyma.06G005900 Glycine max
Glyma.11G097500 Glycine max
Glyma.12G023500 Glycine max
Gohir.A03G202700 Gossypium hirsutum
Gohir.A12G040100 Gossypium hirsutum
Gohir.D02G224000 Gossypium hirsutum
Gohir.D12G032200 Gossypium hirsutum
Gorai.005G251800 Gossypium raimondii
Gorai.008G032900 Gossypium raimondii
GSVIVG01024116001 Vitis vinifera
HanXRQChr15g0468691 Helianthus annuus
HanXRQChr17g0555191 Helianthus annuus
Haze_02210 Corylus avellana
Hma1.2p1_0032F.1_g019720 Hydrangea macrophylla
HPP92_003524 Vanilla planifolia
HPP92_003533 Vanilla planifolia
HPP92_007135 Vanilla planifolia
Hund00052 Selenicereus undatus
Hund06394 Selenicereus undatus
Lalb_Chr19g0139561 Lupinus albus
Lj1g0004015 Lotus japonicus
Lj5A186G40 Lonicera japonica
Lsat_1_v5_gn_8_126780 Lactuca sativa
Manes.04G079000 Manihot esculenta
Manes.11G078000 Manihot esculenta
Mapoly0103s0051 Marchantia polymorpha
MBI05_g15352_MAGBIO Magnolia biondii
MD05G1114400 Malus domestica
MD10G1116400 Malus domestica
Medtr3g117680 Medicago truncatula
Medtr4g075610 Medicago truncatula
MELO3C013383.2 Cucumis melo
Migut.B00161 Erythranthe guttata
MSTRG.16864 Avicennia marina
MSTRG.27666 Avicennia marina
MSTRG.5434 Avicennia marina
Nitab4.5_0000283g0200 Nicotiana tabacum
Nitab4.5_0000980g0350 Nicotiana tabacum
Nn1g05877 Nelumbo nucifera
Nn5g30165 Nelumbo nucifera
Oeu002958.2 Olea europaea
Oeu046121.1 Olea europaea
Oeu055645.1 Olea europaea
Os03g0250000 Oryza sativa ssp. japonica
Os10g0177200 Oryza sativa ssp. japonica
Peaxi162Scf00362g01041 Petunia axillaris
PGR042G1303 Punica granatum
PGSC0003DMG400001638 Solanum tuberosum
Phvul.009G000900 Phaseolus vulgaris
Phvul.011G025600 Phaseolus vulgaris
Potri.004G166900 Populus trichocarpa
Potri.009G127800 Populus trichocarpa
Pp3c5_21520 Physcomitrium patens
Prupe.8G158800 Prunus persica
Psat5g003440 Pisum sativum
Psat7g178120 Pisum sativum
PSO170G3415 Papaver somniferum
PSO541G2336 Papaver somniferum
PSO675G1610 Papaver somniferum
PSO700G0005 Papaver somniferum
QL11p047309 Quercus lobata
RcHm_v2.0_Chr6g0245891 Rosa chinensis
Rhsim11G0187000 Rhododendron simsii
Sabra04G0112000 Salix brachista
Sabra09G0098000 Salix brachista
SalBow6G6339 Salvia bowleyana
Sc18g0006740 Simmondsia chinensis
Sed0015287 Sechium edule
Sed0015502 Sechium edule
SEGI_06358 Sequoiadendron giganteum
SEGI_16256 Sequoiadendron giganteum
SEGI_21972 Sequoiadendron giganteum
SEGI_27774 Sequoiadendron giganteum
SGA_v2.0_scaffold32G13244 Striga asiatica
SHI05655 Sapria himalayana
SMO169G0202 Selaginella moellendorffii
Solyc01g111040.4 Solanum lycopersicum
Sopen01g053100 Solanum pennellii
Sp7g37010 Schrenkiella parvula
TAR376G0227 Trochodendron aralioides
TAR628G0309 Trochodendron aralioides
THA.LOC104824783 Tarenaya hassleriana
Thecc.02G068600 Theobroma cacao
Thhalv10025463m.g Eutrema salsugineum
TPR.G17153 Trifolium pratense
TPR.G38567 Trifolium pratense
TWI31G1308 Tripterygium wilfordii
TWI79G0483 Tripterygium wilfordii
unitig_21.g20808 Utricularia gibba
unitig_21.g20809 Utricularia gibba
unitig_899.g15603 Utricularia gibba
vmacro02239 Vaccinium macrocarpon
vmacro02240 Vaccinium macrocarpon
vmacro22691 Vaccinium macrocarpon
VMungo1127G1183 Vigna mungo
VMungo1309G1106 Vigna mungo
Zm00001eb010730 Zea mays
Zm00001eb224230 Zea mays

User provided reference genes

Program Settings