Gene: AT4G38810

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G38810
  • Transcript Identifier AT4G38810.2
  • Gene Type Coding gene
  • Location Chr4 : 18115607-18118860 : negative

Gene Family Information

  • ID HOM05D004759
  • #Genes/#Species 154/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G38810.2
  • uniprot Q9T0I9

Descriptions

  • Description Calcium-binding EF-hand family protein
  • Computational description Calcium-binding EF-hand family protein; BEST Arabidopsis thaliana protein match is: calcium-binding EF hand family protein (TAIR:AT5G28830.1); Has 178 Blast hits to 109 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 178; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
  • Computational description Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: calcium-binding EF hand family protein (TAIR:AT5G28830.1); Has 314 Blast hits to 218 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 310; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005509
IEA
Gene Ontologycalcium ion binding
GO:0005509
IEA
InterProcalcium ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus
GO:0005829
HDA
Gene Ontologycytosol1
GO:0005886
HDA
Gene Ontologyplasma membrane2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011992 EF-hand domain pair
IPR002048 EF-hand domain
Mapman id Description
27.7.3.1 Multi-process regulation.calcium-dependent signalling.SnRK2-interacting calcium sensor activities.SCS-clade calcium sensor