Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p38630 Brassica napus
Aa31LG11G8130 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2917 Anthoceros agrestis
Actinidia18458 Actinidia chinensis
Actinidia31555 Actinidia chinensis
Ah.13g071340 Amaranthus hybridus
AL8G22360 Arabidopsis lyrata
AL8G22680 Arabidopsis lyrata
Aqoxy6G02121 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.ASV3U0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NMZ4WG Arachis hypogaea
AT5G49010 Arabidopsis thaliana
ATR0691G022 Amborella trichopoda
Atru.chr3.3242 Acer truncatum
Atru.chr4.3041 Acer truncatum
Atru.chr4.3042 Acer truncatum
AUR62016226 Chenopodium quinoa
AUR62039263 Chenopodium quinoa
BcaC06g30731 Brassica carinata
BcaC06g30733 Brassica carinata
BolC7t44486H Brassica oleracea
BraA06t26778Z Brassica rapa
C07p39630 Brassica napus
CAN.G327.11 Capsicum annuum
CAN.G598.3 Capsicum annuum
CANSAT35G1772 Cannabis sativa
CARHR056790 Cardamine hirsuta
CARHR182560 Cardamine hirsuta
CARHR182700 Cardamine hirsuta
CARHR286240 Cardamine hirsuta
CARHR287810 Cardamine hirsuta
Carub.0008s0882 Capsella rubella
Carub.0008s0897 Capsella rubella
Ca_02282_v3 Cicer arietinum L.
Ca_09654_v3 Cicer arietinum L.
CBR_g34308 Chara braunii
Cc00_g03440 Coffea canephora
CDE02G0725 Ceratophyllum demersum
Ciclev10005849m.g Citrus clementina
CiPaw.02G073900 Carya illinoinensis
ClCG05G001400 Citrullus lanatus
COL.COLO4_09634 Corchorus olitorius
COL.COLO4_34597 Corchorus olitorius
Cpa.g.sc9.42 Carica papaya
Cre09.g393600 Chlamydomonas reinhardtii
CsaV3_3G008790 Cucumis sativus L.
CSS0006068 Camellia sinensis var. sinensis
CSS0018454 Camellia sinensis var. sinensis
CSS0037380 Camellia sinensis var. sinensis
DCAR_030461 Daucus carota
Dinv15151 Davidia involucrata
Dinv15152 Davidia involucrata
Dinv44275 Davidia involucrata
Duzib212G0103 Durio zibethinus
ECA236G4776 Erigeron canadensis
EL10Ac3g05524 Beta vulgaris
Eucgr.D00314 Eucalyptus grandis
FAN07G0549 Fragaria x ananassa
FAN07G1636 Fragaria x ananassa
FAN07G1665 Fragaria x ananassa
FAN12G0673 Fragaria x ananassa
FAN12G0808 Fragaria x ananassa
FAN22G0646 Fragaria x ananassa
FAN22G2356 Fragaria x ananassa
FvH4_4g13700 Fragaria vesca
FvH4_4g20000 Fragaria vesca
Glyma.07G011200 Glycine max
Glyma.08G194400 Glycine max
Gohir.A10G173400 Gossypium hirsutum
Gohir.D10G179900 Gossypium hirsutum
Gorai.011G201500 Gossypium raimondii
GSVIVG01034912001 Vitis vinifera
GSVIVG01034926001 Vitis vinifera
GSVIVG01034975001 Vitis vinifera
HanXRQChr10g0291591 Helianthus annuus
HanXRQChr17g0554971 Helianthus annuus
Haze_01314 Corylus avellana
Hma1.2p1_0013F.1_g008380 Hydrangea macrophylla
HPP92_026067 Vanilla planifolia
HPP92_026068 Vanilla planifolia
HPP92_027744 Vanilla planifolia
Lalb_Chr20g0110431 Lupinus albus
Lalb_Chr20g0110441 Lupinus albus
Lalb_Chr20g0115601 Lupinus albus
Lalb_Chr20g0115611 Lupinus albus
Lj3A833G37 Lonicera japonica
Lj3g0003769 Lotus japonicus
Lsat_1_v5_gn_8_139661 Lactuca sativa
Manes.03G206000 Manihot esculenta
Mapoly0029s0136 Marchantia polymorpha
MBI18_g03518_MAGBIO Magnolia biondii
MCO14G052 Micromonas commoda
MD13G1151200 Malus domestica
MD16G1152100 Malus domestica
Medtr2g044210 Medicago truncatula
MELO3C006096.2 Cucumis melo
Migut.G00073 Erythranthe guttata
MSTRG.3853 Avicennia marina
Nitab4.5_0000160g0190 Nicotiana tabacum
Nitab4.5_0002789g0040 Nicotiana tabacum
Nitab4.5_0007792g0050 Nicotiana tabacum
Nn3g21748 Nelumbo nucifera
Oeu001165.1 Olea europaea
Oeu038772.1 Olea europaea
Os05g0143400 Oryza sativa ssp. japonica
Peaxi162Scf00057g02232 Petunia axillaris
PGR031G0191 Punica granatum
PGSC0003DMG400007347 Solanum tuberosum
Phvul.010G140100 Phaseolus vulgaris
Potri.008G103800 Populus trichocarpa
Potri.010G147050 Populus trichocarpa
Pp3c12_20580 Physcomitrium patens
PRCOL_00004769 Prasinoderma coloniale
Prupe.1G115500 Prunus persica
Psat1g138600 Pisum sativum
PSO063G5877 Papaver somniferum
PSO384G4206 Papaver somniferum
PSO782G1146 Papaver somniferum
QL06p012630 Quercus lobata
RcHm_v2.0_Chr4g0425721 Rosa chinensis
RcHm_v2.0_Chr6g0255221 Rosa chinensis
RcHm_v2.0_Chr7g0210081 Rosa chinensis
Rhsim04G0240300 Rhododendron simsii
Rhsim05G0134600 Rhododendron simsii
Sabra08G0078400 Salix brachista
Sabra10G0113400 Salix brachista
SalBow6G0528 Salvia bowleyana
SalBow8G1743 Salvia bowleyana
Sc25g0003230 Simmondsia chinensis
Sed0009995 Sechium edule
SEGI_00745 Sequoiadendron giganteum
SGA_v2.0_scaffold157G37322 Striga asiatica
SHI00123 Sapria himalayana
SMO351G0117 Selaginella moellendorffii
Solyc11g065900.2 Solanum lycopersicum
Sopen11g025640 Solanum pennellii
Sp2g19380 Schrenkiella parvula
TAR376G0735 Trochodendron aralioides
THA.LOC104827096 Tarenaya hassleriana
Thecc.04G302700 Theobroma cacao
Thhalv10004892m.g Eutrema salsugineum
TPR.G27119 Trifolium pratense
TWI09G0594 Tripterygium wilfordii
TWI73G0983 Tripterygium wilfordii
unitig_37.g12782 Utricularia gibba
vmacro08028 Vaccinium macrocarpon
VMungo0331G0107 Vigna mungo
Zm00001eb108600 Zea mays
Zm00001eb143530 Zea mays
Zm00001eb228430 Zea mays
Zm00001eb351450 Zea mays
Zm00001eb401350 Zea mays
Zm00001eb417800 Zea mays

User provided reference genes

Program Settings