Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p38180 Brassica napus
A09p05060 Brassica napus
Aa31LG11G8410 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.2766 Anthoceros agrestis
Actinidia18482 Actinidia chinensis
Actinidia31582 Actinidia chinensis
Ah.07g203910 Amaranthus hybridus
AL6G41130 Arabidopsis lyrata
Aqoxy2G02626 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2F4DQW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.C83F23 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G3761Q Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NS41IF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PZ9WPP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QN1HMQ Arachis hypogaea
AT5G30510 Arabidopsis thaliana
ATR0693G312 Amborella trichopoda
Atru.chr4.3103 Acer truncatum
AUR62002594 Chenopodium quinoa
AUR62030017 Chenopodium quinoa
BcaB04g19641 Brassica carinata
BcaB07g34167 Brassica carinata
BcaC04g23713 Brassica carinata
BcaC06g30694 Brassica carinata
BcaNung02119 Brassica carinata
BolC7t44537H Brassica oleracea
BolC9t53476H Brassica oleracea
BraA06t26733Z Brassica rapa
BraA09t36145Z Brassica rapa
C07p40030 Brassica napus
C09p05470 Brassica napus
CAN.G14.37 Capsicum annuum
CAN.G484.78 Capsicum annuum
CANSAT78G1602 Cannabis sativa
CARHR185550 Cardamine hirsuta
Carub.0020s0005 Capsella rubella
Ca_00945_v3 Cicer arietinum L.
Ca_00951_v3 Cicer arietinum L.
CBR_g34276 Chara braunii
Cc03_g00460 Coffea canephora
CDE05G1409 Ceratophyllum demersum
CDE11G1204 Ceratophyllum demersum
Cfa015690 Carpinus fangiana
Cfa015692 Carpinus fangiana
Ciclev10005364m.g Citrus clementina
CiPaw.01G133400 Carya illinoinensis
CiPaw.02G072000 Carya illinoinensis
ClCG05G006720 Citrullus lanatus
ClCG06G004350 Citrullus lanatus
ClCG08G002550 Citrullus lanatus
COL.COLO4_34557 Corchorus olitorius
Cpa.g.sc146.69 Carica papaya
Cre09.g394750 Chlamydomonas reinhardtii
CsaV3_3G015350 Cucumis sativus L.
CSS0034217 Camellia sinensis var. sinensis
DCAR_002527 Daucus carota
DCAR_023377 Daucus carota
DCAR_026966 Daucus carota
DCAR_026969 Daucus carota
Dinv15126 Davidia involucrata
Dinv44245 Davidia involucrata
Duzib052G0436 Durio zibethinus
Duzib212G0400 Durio zibethinus
ECA233G6062 Erigeron canadensis
EL10Ac3g06292 Beta vulgaris
Eucgr.H04084 Eucalyptus grandis
FAN07G1987 Fragaria x ananassa
FAN12G4036 Fragaria x ananassa
FAN17G0333 Fragaria x ananassa
FvH4_4g20780 Fragaria vesca
Glyma.07G235700 Glycine max
Glyma.09G031800 Glycine max
Glyma.15G136800 Glycine max
Glyma.17G037700 Glycine max
Gohir.A02G056300 Gossypium hirsutum
Gohir.D02G061500 Gossypium hirsutum
Gorai.005G069200 Gossypium raimondii
GSVIVG01034940001 Vitis vinifera
HanXRQChr11g0353951 Helianthus annuus
Haze_00830 Corylus avellana
Hma1.2p1_1096F.1_g256640 Hydrangea macrophylla
HPP92_001941 Vanilla planifolia
Hund12232 Selenicereus undatus
Lalb_Chr07g0181881 Lupinus albus
Lalb_Chr15g0089031 Lupinus albus
Lalb_Chr20g0120631 Lupinus albus
Lj3A836T25 Lonicera japonica
Lj6g0001722 Lotus japonicus
Lsat_1_v5_gn_1_40241 Lactuca sativa
Lsat_1_v5_gn_6_69461 Lactuca sativa
Manes.15G003100 Manihot esculenta
Mapoly0018s0004 Marchantia polymorpha
MBI19_g32690_MAGBIO Magnolia biondii
MCO03G484 Micromonas commoda
MD13G1147900 Malus domestica
MD16G1147700 Malus domestica
Medtr2g033020 Medicago truncatula
MELO3C006733.2 Cucumis melo
MELO3C025002.2 Cucumis melo
Migut.G00023 Erythranthe guttata
MSTRG.10175 Avicennia marina
MSTRG.24833 Avicennia marina
Nitab4.5_0000186g0060 Nicotiana tabacum
Nitab4.5_0004298g0040 Nicotiana tabacum
Nn3g21829 Nelumbo nucifera
Oeu052155.2 Olea europaea
Os03g0315800 Oryza sativa ssp. japonica
Peaxi162Scf00126g01416 Petunia axillaris
PGR004G0801 Punica granatum
PGSC0003DMG400001233 Solanum tuberosum
PGSC0003DMG400004609 Solanum tuberosum
Phvul.003G118600 Phaseolus vulgaris
Phvul.006G121100 Phaseolus vulgaris
Potri.008G101100 Populus trichocarpa
Potri.010G150300 Populus trichocarpa
Pp3c10_21790 Physcomitrium patens
Pp3c20_22450 Physcomitrium patens
PRCOL_00002737 Prasinoderma coloniale
Prupe.1G111400 Prunus persica
Psat1g162760 Pisum sativum
PSO210G2951 Papaver somniferum
PSO761G0404 Papaver somniferum
QL06p013334 Quercus lobata
RcHm_v2.0_Chr4g0426221 Rosa chinensis
Rhsim04G0243100 Rhododendron simsii
Sabra08G0076400 Salix brachista
Sabra10G0115700 Salix brachista
SalBow8G3582 Salvia bowleyana
Sc25g0001600 Simmondsia chinensis
Sed0000500 Sechium edule
Sed0001457 Sechium edule
Sed0002093 Sechium edule
Sed0009218 Sechium edule
SGA_v2.0_scaffold157G37359 Striga asiatica
SMO146G0227 Selaginella moellendorffii
Solyc01g057830.3 Solanum lycopersicum
Solyc12g099110.2 Solanum lycopersicum
Sopen01g023160 Solanum pennellii
Sopen12g033820 Solanum pennellii
Sp2g19940 Schrenkiella parvula
TAR362G1183 Trochodendron aralioides
TAR636G0490 Trochodendron aralioides
THA.LOC104818863 Tarenaya hassleriana
Thecc.04G307500 Theobroma cacao
Thhalv10004302m.g Eutrema salsugineum
TPR.G10105 Trifolium pratense
TWI09G1490 Tripterygium wilfordii
TWI53G1192 Tripterygium wilfordii
unitig_22.g6348 Utricularia gibba
unitig_8.g3098 Utricularia gibba
unitig_8.g3099 Utricularia gibba
unitig_8.g3100 Utricularia gibba
vmacro07975 Vaccinium macrocarpon
VMungo0540G1791 Vigna mungo
VMungo1215G2486 Vigna mungo
VMungo1215G3325 Vigna mungo
Zm00001eb395590 Zea mays

User provided reference genes

Program Settings