Gene: Sopen12g033820

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen12g033820
  • Transcript Identifier Sopen12g033820.1
  • Gene Type Coding gene
  • Location Spenn-ch12 : 82302732-82307803 : positive

Gene Family Information

  • ID HOM05D004458
  • #Genes/#Species 161/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen12g033820.1

Descriptions

  • Description 30S ribosomal protein S1, chloroplast precursor (CS1) - Spinacia oleracea (Spinach), ribosomal protein S1 (RPS1) | FUNCTIONS IN: RNA binding | LOCATED IN: thylakoid, chloroplast stroma, chloroplast, membrane | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like , Nucleic acid-binding, OB-fold , Ribosomal protein S1, RNA-binding domain | BEST Arabidopsis thaliana protein match is: Nucleic acid-binding proteins superfamily
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT5G30510

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT5G30510
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT5G30510
GO:0009579
ISO
PLAZA Integrative Orthologythylakoid AT5G30510

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR012340 Nucleic acid-binding, OB-fold
IPR003029 S1 domain
IPR022967 RNA-binding domain, S1
Mapman id Description
17.7.2.2.1 Protein biosynthesis.organelle machinery.plastidial ribosome.small ribosomal subunit proteome.component psRPS1