Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p10050 Brassica napus
A03p50990 Brassica napus
Aa31LG6G760 Aethionema arabicum
Actinidia10882 Actinidia chinensis
Actinidia25946 Actinidia chinensis
Ah.07g200080 Amaranthus hybridus
AL7G36430 Arabidopsis lyrata
Aqoxy3G02502 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.D788HE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F8U6QL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LEG0TK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UB10Y8 Arachis hypogaea
AT4G18020 Arabidopsis thaliana
ATR0049G045 Amborella trichopoda
Atru.chr6.1768 Acer truncatum
AUR62007236 Chenopodium quinoa
AUR62018764 Chenopodium quinoa
BcaC06g33604 Brassica carinata
BcaC09g51558 Brassica carinata
BcaNung00035 Brassica carinata
BcaNung05099 Brassica carinata
BolC1t01162H Brassica oleracea
BolC7t45445H Brassica oleracea
BraA01t00951Z Brassica rapa
BraA03t14184Z Brassica rapa
C01p11870 Brassica napus
C07p49390 Brassica napus
CAN.G201.10 Capsicum annuum
CAN.G799.11 Capsicum annuum
CANSAT21G2302 Cannabis sativa
CARHR224790 Cardamine hirsuta
Carub.0007s2331 Capsella rubella
Carub.0008s1864 Capsella rubella
Ca_19123_v3 Cicer arietinum L.
Ca_22046_v3 Cicer arietinum L.
Ca_24635_v3 Cicer arietinum L.
Cc08_g02100 Coffea canephora
CDE04G1136 Ceratophyllum demersum
Ciclev10031120m.g Citrus clementina
CiPaw.11G088000 Carya illinoinensis
ClCG09G012330 Citrullus lanatus
ClCG10G001890 Citrullus lanatus
COL.COLO4_17104 Corchorus olitorius
COL.COLO4_17105 Corchorus olitorius
Cpa.g.sc6.428 Carica papaya
CsaV3_1G017010 Cucumis sativus L.
CsaV3_3G002030 Cucumis sativus L.
CsaV3_3G049490 Cucumis sativus L.
CSS0037714 Camellia sinensis var. sinensis
DCAR_008297 Daucus carota
Dinv25187 Davidia involucrata
Dinv28920 Davidia involucrata
Duzib068G0312 Durio zibethinus
Duzib084G1148 Durio zibethinus
Duzib205G1207 Durio zibethinus
ECA233G0090 Erigeron canadensis
EL10Ac5g12185 Beta vulgaris
Eucgr.E00308 Eucalyptus grandis
FAN04G0921 Fragaria x ananassa
FAN08G0643 Fragaria x ananassa
FAN13G0588 Fragaria x ananassa
FAN18G1055 Fragaria x ananassa
FvH4_5g21280 Fragaria vesca
Glyma.01G200800 Glycine max
Glyma.05G070200 Glycine max
Glyma.11G041300 Glycine max
Glyma.17G152800 Glycine max
Gohir.A03G002500 Gossypium hirsutum
Gohir.A08G159400 Gossypium hirsutum
Gohir.A12G210500 Gossypium hirsutum
Gohir.D03G169800 Gossypium hirsutum
Gohir.D08G179832 Gossypium hirsutum
Gohir.D12G213200 Gossypium hirsutum
Gorai.003G180100 Gossypium raimondii
Gorai.004G188300 Gossypium raimondii
Gorai.008G228800 Gossypium raimondii
GSVIVG01013234001 Vitis vinifera
HanXRQChr10g0305491 Helianthus annuus
HanXRQChr16g0511501 Helianthus annuus
Haze_08293 Corylus avellana
Hma1.2p1_0414F.1_g147780 Hydrangea macrophylla
HPP92_020913 Vanilla planifolia
Hund11268 Selenicereus undatus
Hund14426 Selenicereus undatus
Lalb_Chr05g0214071 Lupinus albus
Lalb_Chr05g0220661 Lupinus albus
Lalb_Chr09g0323931 Lupinus albus
Lalb_Chr16g0379201 Lupinus albus
Lalb_Chr16g0386131 Lupinus albus
Lalb_Chr16g0386141 Lupinus albus
Lj2C245G6 Lonicera japonica
Lj2g0001410 Lotus japonicus
Lj4g0007873 Lotus japonicus
Lsat_1_v5_gn_5_73301 Lactuca sativa
Lsat_1_v5_gn_6_66681 Lactuca sativa
Manes.15G173500 Manihot esculenta
Manes.17G019500 Manihot esculenta
MBI04_g31971_MAGBIO Magnolia biondii
MD06G1039500 Malus domestica
MD16G1269900 Malus domestica
Medtr4g098870 Medicago truncatula
Medtr5g014040 Medicago truncatula
MELO3C003375.2 Cucumis melo
MELO3C013874.2 Cucumis melo
Nitab4.5_0002055g0150 Nicotiana tabacum
Nitab4.5_0003100g0090 Nicotiana tabacum
Nitab4.5_0004327g0030 Nicotiana tabacum
Nitab4.5_0004658g0020 Nicotiana tabacum
Nn1g00605 Nelumbo nucifera
Nn6g33664 Nelumbo nucifera
Oeu028033.3 Olea europaea
Oeu053057.1 Olea europaea
Oeu053058.1 Olea europaea
Peaxi162Scf00312g00089 Petunia axillaris
Peaxi162Scf00497g00086 Petunia axillaris
PGR042G2029 Punica granatum
PGSC0003DMG400024217 Solanum tuberosum
PGSC0003DMG400026587 Solanum tuberosum
Phvul.002G004800 Phaseolus vulgaris
Phvul.003G068200 Phaseolus vulgaris
Phvul.003G228600 Phaseolus vulgaris
Phvul.005G092900 Phaseolus vulgaris
Potri.001G146200 Populus trichocarpa
Potri.003G087700 Populus trichocarpa
Prupe.5G045000 Prunus persica
Psat2g174400 Pisum sativum
Psat4g078160 Pisum sativum
Psat4g078200 Pisum sativum
Psat4g078240 Pisum sativum
PSO063G2488 Papaver somniferum
PSO782G0165 Papaver somniferum
QL12p006931 Quercus lobata
RcHm_v2.0_Chr7g0208371 Rosa chinensis
Rhsim11G0011500 Rhododendron simsii
Sabra01G0115000 Salix brachista
Sabra03G0057600 Salix brachista
Sc01g0007720 Simmondsia chinensis
Sed0011482 Sechium edule
SEGI_40150 Sequoiadendron giganteum
Solyc06g061030.3 Solanum lycopersicum
Solyc08g077230.3 Solanum lycopersicum
Sopen06g021230 Solanum pennellii
Sopen08g025810 Solanum pennellii
Sp7g16100 Schrenkiella parvula
TAR375G0005 Trochodendron aralioides
TAR629G3324 Trochodendron aralioides
TAR636G1186 Trochodendron aralioides
THA.LOC104813341 Tarenaya hassleriana
THA.LOC104827744 Tarenaya hassleriana
Thecc.03G233600 Theobroma cacao
Thhalv10024919m.g Eutrema salsugineum
TPR.G19197 Trifolium pratense
TPR.G27537 Trifolium pratense
TWI15G0295 Tripterygium wilfordii
TWI60G0553 Tripterygium wilfordii
TWI81G0709 Tripterygium wilfordii
vmacro00350 Vaccinium macrocarpon
VMungo0251G1596 Vigna mungo
VMungo1215G0556 Vigna mungo

User provided reference genes

Program Settings