Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p44780 Brassica napus
Aa31LG5G12440 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.4941 Anthoceros agrestis
Actinidia38766 Actinidia chinensis
Actinidia38784 Actinidia chinensis
Ah.10g031590 Amaranthus hybridus
Ah.12g059870 Amaranthus hybridus
AL3G11070 Arabidopsis lyrata
Aqoxy3G03405 Aquilegia oxysepala
Aqoxy3G03409 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.27CGVJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9G3TAM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UUZ1A7 Arachis hypogaea
AT3G01180 Arabidopsis thaliana
ATR0564G338 Amborella trichopoda
Atru.chr8.178 Acer truncatum
AUR62034405 Chenopodium quinoa
AUR62039808 Chenopodium quinoa
BcaC05g30487 Brassica carinata
BcaC09g47673 Brassica carinata
BNapus_Darmor_BZH_scaffold_97p00120 Brassica napus
BolC1t05933H Brassica oleracea
BolC5t35123H Brassica oleracea
BraA05t23179Z Brassica rapa
C09p75370 Brassica napus
CAN.G206.155 Capsicum annuum
CANSAT64G2318 Cannabis sativa
CARHR075860 Cardamine hirsuta
Carub.0003s0097 Capsella rubella
Ca_02910_v3 Cicer arietinum L.
Ca_04285_v3 Cicer arietinum L.
Ca_29846_v3 Cicer arietinum L.
CBR_g23365 Chara braunii
Cc07_g03430 Coffea canephora
CDE02G4400 Ceratophyllum demersum
CDE04G1630 Ceratophyllum demersum
CDE09G0475 Ceratophyllum demersum
Cfa007563 Carpinus fangiana
Cfa007565 Carpinus fangiana
Ciclev10011124m.g Citrus clementina
CiPaw.03G025800 Carya illinoinensis
CiPaw.04G016900 Carya illinoinensis
ClCG10G015190 Citrullus lanatus
COL.COLO4_08442 Corchorus olitorius
Cpa.g.c36490 Carica papaya
Cre03.g185250 Chlamydomonas reinhardtii
CsaV3_3G041330 Cucumis sativus L.
CSS0032498 Camellia sinensis var. sinensis
CSS0035890 Camellia sinensis var. sinensis
CSS0036692 Camellia sinensis var. sinensis
CSS0041358 Camellia sinensis var. sinensis
DCAR_005562 Daucus carota
Dinv33768 Davidia involucrata
Dinv34148 Davidia involucrata
Duzib147G1357 Durio zibethinus
Duzib187G1959 Durio zibethinus
ECA232G4228 Erigeron canadensis
ECA238G0428 Erigeron canadensis
EL10Ac2g02984 Beta vulgaris
Eucgr.J01349 Eucalyptus grandis
FAN02G2319 Fragaria x ananassa
FAN09G0920 Fragaria x ananassa
FAN14G5629 Fragaria x ananassa
FvH4_6g48410 Fragaria vesca
Glyma.13G062700 Glycine max
Glyma.19G022900 Glycine max
Gohir.A07G205600 Gossypium hirsutum
Gohir.A09G015500 Gossypium hirsutum
Gohir.D07G211700 Gossypium hirsutum
Gohir.D09G014100 Gossypium hirsutum
Gorai.001G239200 Gossypium raimondii
Gorai.006G016400 Gossypium raimondii
Gorai.009G348800 Gossypium raimondii
GSVIVG01011429001 Vitis vinifera
HanXRQChr09g0265221 Helianthus annuus
HanXRQChr14g0449751 Helianthus annuus
Haze_14520 Corylus avellana
HPP92_006007 Vanilla planifolia
HPP92_006026 Vanilla planifolia
Hund15597 Selenicereus undatus
Lalb_Chr02g0159331 Lupinus albus
Lalb_Chr21g0318691 Lupinus albus
Lj1g0028208 Lotus japonicus
Lj2g0016593 Lotus japonicus
Lj4A110T78 Lonicera japonica
Lsat_1_v5_gn_2_88360 Lactuca sativa
Manes.01G091700 Manihot esculenta
Manes.02G046733 Manihot esculenta
Mapoly0148s0026 Marchantia polymorpha
MBI02_g15396_MAGBIO Magnolia biondii
MBI05_g34358_MAGBIO Magnolia biondii
MCO08G308 Micromonas commoda
MCO15G226 Micromonas commoda
MD00G1130900 Malus domestica
MD09G1052000 Malus domestica
Medtr6g012380 Medicago truncatula
MELO3C009861.2 Cucumis melo
Migut.H00928 Erythranthe guttata
MSTRG.3241 Avicennia marina
Nitab4.5_0000564g0020 Nicotiana tabacum
Nitab4.5_0002980g0050 Nicotiana tabacum
Nn1g04753 Nelumbo nucifera
Nn1g06156 Nelumbo nucifera
Nn3g17255 Nelumbo nucifera
Oeu027853.1 Olea europaea
Oeu027855.1 Olea europaea
Oeu027856.1 Olea europaea
Oeu039526.1 Olea europaea
Os02g0744700 Oryza sativa ssp. japonica
Os06g0229800 Oryza sativa ssp. japonica
Os10g0437600 Oryza sativa ssp. japonica
Peaxi162Scf00129g00129 Petunia axillaris
PGR004G2567 Punica granatum
PGSC0003DMG400001328 Solanum tuberosum
Phvul.004G029100 Phaseolus vulgaris
Phvul.008G036600 Phaseolus vulgaris
Potri.017G084100 Populus trichocarpa
Pp3c19_7710 Physcomitrium patens
Pp3c19_7712 Physcomitrium patens
Pp3c21_6820 Physcomitrium patens
Pp3c21_6821 Physcomitrium patens
Pp3c22_6120 Physcomitrium patens
PRCOL_00002606 Prasinoderma coloniale
PRCOL_00002796 Prasinoderma coloniale
Prupe.3G266700 Prunus persica
Psat1g073520 Pisum sativum
PSO013G0263 Papaver somniferum
PSO832G4046 Papaver somniferum
QL02p082359 Quercus lobata
RcHm_v2.0_Chr2g0168331 Rosa chinensis
Rhsim08G0070300 Rhododendron simsii
Sabra17G0074200 Salix brachista
SalBow1G3534 Salvia bowleyana
SalBow1G6141 Salvia bowleyana
Sc10g0003570 Simmondsia chinensis
Sed0000175 Sechium edule
Sed0017521 Sechium edule
SEGI_10180 Sequoiadendron giganteum
SEGI_17123 Sequoiadendron giganteum
SEGI_31741 Sequoiadendron giganteum
SGA_v2.0_scaffold499G52491 Striga asiatica
SMO234G0040 Selaginella moellendorffii
Solyc02g088000.3 Solanum lycopersicum
Sopen02g032740 Solanum pennellii
Sp3g00920 Schrenkiella parvula
TAR374G1602 Trochodendron aralioides
TAR622G0870 Trochodendron aralioides
THA.LOC104822355 Tarenaya hassleriana
Thecc.04G083300 Theobroma cacao
Thhalv10020091m.g Eutrema salsugineum
TPR.G8813 Trifolium pratense
TWI32G0103 Tripterygium wilfordii
vmacro18187 Vaccinium macrocarpon
VMungo0464G2006 Vigna mungo
VMungo1383G0284 Vigna mungo
Zm00001eb194550 Zea mays
Zm00001eb222830 Zea mays
Zm00001eb254490 Zea mays
Zm00001eb279740 Zea mays

User provided reference genes

Program Settings