Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p39430 Brassica napus
A06p16920 Brassica napus
Aa31LG7G5080 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2413 Anthoceros agrestis
Actinidia03820 Actinidia chinensis
Actinidia06683 Actinidia chinensis
Ah.02g111060 Amaranthus hybridus
AL1G33940 Arabidopsis lyrata
AL3G20800 Arabidopsis lyrata
AL3G20830 Arabidopsis lyrata
Aqoxy3G00377 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.L6ML9N Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SNDG00 Arachis hypogaea
AT1G20920 Arabidopsis thaliana
AT3G09620 Arabidopsis thaliana
ATR0026G005 Amborella trichopoda
Atru.chr13.40 Acer truncatum
AUR62008074 Chenopodium quinoa
AUR62028651 Chenopodium quinoa
BcaB07g32087 Brassica carinata
BcaC05g29688 Brassica carinata
BolC5t30657H Brassica oleracea
BraA05t22724Z Brassica rapa
BraA06t24801Z Brassica rapa
C05p19550 Brassica napus
C05p58460 Brassica napus
CAN.G484.129 Capsicum annuum
CANSAT25G0994 Cannabis sativa
CANSAT54G2992 Cannabis sativa
CANSAT80G1993 Cannabis sativa
CARHR021350 Cardamine hirsuta
CARHR084020 Cardamine hirsuta
Carub.0001s2039 Capsella rubella
Carub.0003s0871 Capsella rubella
Ca_00072_v3 Cicer arietinum L.
CBR_g1094 Chara braunii
Cc10_g09510 Coffea canephora
CDE10G0171 Ceratophyllum demersum
CDE10G0325 Ceratophyllum demersum
Cfa026398 Carpinus fangiana
Ciclev10004206m.g Citrus clementina
Ciclev10033681m.g Citrus clementina
CiPaw.07G132300 Carya illinoinensis
CiPaw.08G077500 Carya illinoinensis
COL.COLO4_15052 Corchorus olitorius
COL.COLO4_18817 Corchorus olitorius
Cre16.g676400 Chlamydomonas reinhardtii
CsaV3_1G004420 Cucumis sativus L.
CSS0001210 Camellia sinensis var. sinensis
CSS0029599 Camellia sinensis var. sinensis
DCAR_014858 Daucus carota
Dinv00631 Davidia involucrata
Dinv08398 Davidia involucrata
Dinv41857 Davidia involucrata
ECA236G4031 Erigeron canadensis
EL10Ac5g10595 Beta vulgaris
Eucgr.H04402 Eucalyptus grandis
FAN07G2121 Fragaria x ananassa
FAN08G3167 Fragaria x ananassa
FAN11G2913 Fragaria x ananassa
FAN12G1243 Fragaria x ananassa
FAN12G3144 Fragaria x ananassa
FAN13G2197 Fragaria x ananassa
FAN14G1745 Fragaria x ananassa
FAN16G2027 Fragaria x ananassa
FAN18G2296 Fragaria x ananassa
FAN18G4565 Fragaria x ananassa
FAN19G0728 Fragaria x ananassa
FAN21G1317 Fragaria x ananassa
FAN25G3114 Fragaria x ananassa
FAN27G2340 Fragaria x ananassa
FAN27G2373 Fragaria x ananassa
FAN27G2867 Fragaria x ananassa
FvH4_3g27090 Fragaria vesca
FvH4_4g11724 Fragaria vesca
FvH4_4g11730 Fragaria vesca
FvH4_5g26270 Fragaria vesca
Glyma.01G229400 Glycine max
Glyma.11G012200 Glycine max
Gohir.A10G219800 Gossypium hirsutum
Gohir.D10G229300 Gossypium hirsutum
Gorai.011G261800 Gossypium raimondii
GSVIVG01023849001 Vitis vinifera
HanXRQChr04g0120591 Helianthus annuus
Haze_22871 Corylus avellana
Haze_26383 Corylus avellana
Hma1.2p1_0243F.1_g100970 Hydrangea macrophylla
Hma1.2p1_0461F.1_g157750 Hydrangea macrophylla
Hma1.2p1_0752F.1_g212840 Hydrangea macrophylla
HPP92_020001 Vanilla planifolia
Lalb_Chr05g0211311 Lupinus albus
Lj1P1157T27 Lonicera japonica
LjContig00357g0018371 Lotus japonicus
Lsat_1_v5_gn_5_186120 Lactuca sativa
Manes.07G023900 Manihot esculenta
Manes.18G001400 Manihot esculenta
Mapoly0043s0067 Marchantia polymorpha
MCO10G288 Micromonas commoda
MD06G1002800 Malus domestica
MD09G1086200 Malus domestica
MD17G1075900 Malus domestica
MD17G1104700 Malus domestica
Medtr2g007000 Medicago truncatula
MELO3C017365.2 Cucumis melo
Migut.J00408 Erythranthe guttata
MSTRG.19133 Avicennia marina
Nitab4.5_0000978g0150 Nicotiana tabacum
Nitab4.5_0006519g0020 Nicotiana tabacum
Nn3g20640 Nelumbo nucifera
Oeu011760.2 Olea europaea
Oeu013648.1 Olea europaea
Os08g0154200 Oryza sativa ssp. japonica
Os08g0154225 Oryza sativa ssp. japonica
Os08g0159900 Oryza sativa ssp. japonica
Peaxi162Scf00378g00612 Petunia axillaris
PGR004G1561 Punica granatum
PGSC0003DMG400004585 Solanum tuberosum
Phvul.002G037900 Phaseolus vulgaris
Potri.002G003600 Populus trichocarpa
Potri.005G257400 Populus trichocarpa
Pp3c5_17030 Physcomitrium patens
Pp3c6_15830 Physcomitrium patens
PRCOL_00005516 Prasinoderma coloniale
Prupe.5G003900 Prunus persica
Psat1g220440 Pisum sativum
PSO210G4406 Papaver somniferum
PSO339G3273 Papaver somniferum
PSO541G3440 Papaver somniferum
PSO675G1280 Papaver somniferum
PSO675G2558 Papaver somniferum
PSO732G0518 Papaver somniferum
PSO801G0829 Papaver somniferum
PSO832G1396 Papaver somniferum
QL02p015964 Quercus lobata
RcHm_v2.0_Chr5g0049651 Rosa chinensis
RcHm_v2.0_Chr7g0217001 Rosa chinensis
Sabra02G0002400 Salix brachista
Sabra05G0199300 Salix brachista
Sc05g0001650 Simmondsia chinensis
Sed0024778 Sechium edule
SEGI_23155 Sequoiadendron giganteum
SGA_v2.0_scaffold126G33886 Striga asiatica
SHI11410 Sapria himalayana
SMO197G0006 Selaginella moellendorffii
Solyc12g098700.1 Solanum lycopersicum
Sopen12g033450 Solanum pennellii
Sp1g18620 Schrenkiella parvula
TAR381G1187 Trochodendron aralioides
TAR625G0446 Trochodendron aralioides
TAR625G1369 Trochodendron aralioides
THA.LOC104806094 Tarenaya hassleriana
THA.LOC104813731 Tarenaya hassleriana
THA.LOC104824727 Tarenaya hassleriana
Thecc.10G041100 Theobroma cacao
Thhalv10006608m.g Eutrema salsugineum
Thhalv10022167m.g Eutrema salsugineum
TPR.G14104 Trifolium pratense
TPR.G2143 Trifolium pratense
unitig_749.g14266 Utricularia gibba
vmacro01070 Vaccinium macrocarpon
VMungo1215G1856 Vigna mungo
Zm00001eb415650 Zea mays

User provided reference genes

Program Settings