Gene: Os08g0154225

General Information

Structural Information

Species Oryza sativa ssp. japonica
Gene Identifier Os08g0154225
Transcript Identifier Os08t0154225-00
Gene Type Coding gene
Location chr08 : 3115509-3117296 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000032
#Genes/#Species 5307/100
Phylogenetic origin

ID ORTHO05D005217
#Genes/#Species 162/92
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate

Labels

Identifiers

tid Os08t0154225-00
MSU-ID LOC_Os08g05810.1
uniprot A0A0P0XCD9

Descriptions

Short descriptions
Ortholog descriptions

Description DEAD-box ATP-dependent RNA helicase 42.

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0000398	IBA	GOA Database	mRNA splicing, via spliceosome

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0003723	IEA	GOA Database	RNA binding
GO:0016787	IEA	GOA Database	hydrolase activity
GO:0000166	IEA	GOA Database	nucleotide binding
GO:0004386	IEA	GOA Database	helicase activity
GO:0005524	IEA	GOA Database	ATP binding
GO:0005524	IEA	InterPro	ATP binding
GO:0003724	IEA	GOA Database	RNA helicase activity
GO:0003676	IEA	GOA Database	nucleic acid binding
GO:0003676	IEA	InterPro	nucleic acid binding

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005634	IBA	GOA Database	nucleus

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR027417	P-loop containing nucleoside triphosphate hydrolase
IPR014001	Helicase superfamily 1/2, ATP-binding domain
IPR011545	DEAD/DEAH box helicase domain
IPR001650	Helicase, C-terminal

Mapman id	Description
16.2.7.1.2	RNA processing.pre-mRNA splicing.spliceosome assembly and disassembly.RNA helicase activities.RNA helicase (Prp5)