Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p25450 Brassica napus
A09p34380 Brassica napus
Aa31LG9G15640 Aethionema arabicum
Aa31LG9G6660 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3835 Anthoceros agrestis
Actinidia10879 Actinidia chinensis
Actinidia31472 Actinidia chinensis
Ah.09g224390 Amaranthus hybridus
AL1G45970 Arabidopsis lyrata
AL3G52660 Arabidopsis lyrata
Aqoxy3G00393 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.45D7QY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.522STQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ARJY2C Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FR68MS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I1PL9V Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MH0ZUI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MX4EXC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VXMI6Z Arachis hypogaea
AT1G31870 Arabidopsis thaliana
ATR0665G406 Amborella trichopoda
Atru.chr1.3775 Acer truncatum
AUR62007222 Chenopodium quinoa
AUR62018778 Chenopodium quinoa
BcaB03g13784 Brassica carinata
BcaC05g27949 Brassica carinata
BolC5t32694H Brassica oleracea
BraA05t21429Z Brassica rapa
BraA09t38983Z Brassica rapa
C05p31200 Brassica napus
C05p39530 Brassica napus
CAN.G1186.1 Capsicum annuum
CAN.G1336.5 Capsicum annuum
CAN.G1823.5 Capsicum annuum
CAN.G248.21 Capsicum annuum
CANSAT21G1629 Cannabis sativa
CARHR031210 Cardamine hirsuta
CARHR062710 Cardamine hirsuta
Carub.0001s3020 Capsella rubella
CBR_g26347 Chara braunii
Cc01_g02120 Coffea canephora
CDE02G1296 Ceratophyllum demersum
CDE11G0710 Ceratophyllum demersum
Cfa012380 Carpinus fangiana
Cfa026589 Carpinus fangiana
Ciclev10033653m.g Citrus clementina
CiPaw.04G096200 Carya illinoinensis
CiPaw.11G087400 Carya illinoinensis
ClCG03G011240 Citrullus lanatus
COL.COLO4_13527 Corchorus olitorius
COL.COLO4_33038 Corchorus olitorius
Cpa.g.c30383 Carica papaya
Cpa.g.sc69.32 Carica papaya
Cpa.g.sc69.34 Carica papaya
Cre01.g003487 Chlamydomonas reinhardtii
CsaV3_1G025570 Cucumis sativus L.
CsaV3_1G026630 Cucumis sativus L.
CsaV3_2G035720 Cucumis sativus L.
CsaV3_3G032900 Cucumis sativus L.
CsaV3_7G018470 Cucumis sativus L.
CsaV3_UNG068570 Cucumis sativus L.
CSS0001415 Camellia sinensis var. sinensis
CSS0014122 Camellia sinensis var. sinensis
CSS0026269 Camellia sinensis var. sinensis
CSS0037993 Camellia sinensis var. sinensis
DCAR_007574 Daucus carota
DCAR_015696 Daucus carota
Dinv25182 Davidia involucrata
Duzib128G0331 Durio zibethinus
ECA233G1538 Erigeron canadensis
EL10Ac4g09041 Beta vulgaris
FAN07G2732 Fragaria x ananassa
FAN12G0331 Fragaria x ananassa
FAN17G2609 Fragaria x ananassa
FAN22G0510 Fragaria x ananassa
FvH4_4g36560 Fragaria vesca
Glyma.07G070900 Glycine max
Gohir.A11G262400 Gossypium hirsutum
Gohir.D11G272400 Gossypium hirsutum
Gorai.007G293700 Gossypium raimondii
GSVIVG01013206001 Vitis vinifera
HanXRQChr12g0372541 Helianthus annuus
HanXRQChr16g0500491 Helianthus annuus
Haze_08305 Corylus avellana
Haze_08308 Corylus avellana
Hma1.2p1_0311F.1_g121260 Hydrangea macrophylla
HPP92_020119 Vanilla planifolia
HPP92_020120 Vanilla planifolia
HPP92_020129 Vanilla planifolia
HPP92_020130 Vanilla planifolia
Hund11272 Selenicereus undatus
Hund11501 Selenicereus undatus
Lalb_Chr04g0258181 Lupinus albus
Lj2C247G5 Lonicera japonica
Lj2C247T7 Lonicera japonica
Lj3g0000626 Lotus japonicus
Lj6C290G5 Lonicera japonica
Lsat_1_v5_gn_3_2421 Lactuca sativa
Lsat_1_v5_gn_6_63641 Lactuca sativa
Manes.15G172200 Manihot esculenta
Mapoly0062s0011 Marchantia polymorpha
MCO15G532 Micromonas commoda
MD16G1006500 Malus domestica
Medtr4g081620 Medicago truncatula
Medtr4g081725 Medicago truncatula
Medtr8g030840 Medicago truncatula
Medtr8g446970 Medicago truncatula
MELO3C024775.2 Cucumis melo
Migut.J01084 Erythranthe guttata
Nitab4.5_0005084g0010 Nicotiana tabacum
Nitab4.5_0008421g0010 Nicotiana tabacum
Nn6g33684 Nelumbo nucifera
Oeu037610.2 Olea europaea
Oeu045705.2 Olea europaea
Os08g0178300 Oryza sativa ssp. japonica
Peaxi162Scf01164g00006 Petunia axillaris
PGSC0003DMG400022576 Solanum tuberosum
Phvul.010G098800 Phaseolus vulgaris
Phvul.011G076400 Phaseolus vulgaris
Potri.001G147100 Populus trichocarpa
Potri.003G087200 Populus trichocarpa
Pp3c3_10050 Physcomitrium patens
PRCOL_00005638 Prasinoderma coloniale
Prupe.8G202500 Prunus persica
Psat4g154840 Pisum sativum
PSO063G6462 Papaver somniferum
PSO782G4920 Papaver somniferum
PSO832G0693 Papaver somniferum
QL03p017813 Quercus lobata
QL12p007207 Quercus lobata
RcHm_v2.0_Chr4g0446311 Rosa chinensis
Rhsim07G0121900 Rhododendron simsii
Sabra03G0056900 Salix brachista
Sc22g0001370 Simmondsia chinensis
Sed0018208 Sechium edule
Sed0024296 Sechium edule
SEGI_39298 Sequoiadendron giganteum
SGA_v2.0_scaffold86G26890 Striga asiatica
SHI10270 Sapria himalayana
SMO118G0163 Selaginella moellendorffii
SMO144G0180 Selaginella moellendorffii
Solyc03g033950.4 Solanum lycopersicum
Solyc11g066530.3 Solanum lycopersicum
Sopen03g006700 Solanum pennellii
Sp1g27590 Schrenkiella parvula
Sp5g21510 Schrenkiella parvula
TAR629G2821 Trochodendron aralioides
THA.LOC104812727 Tarenaya hassleriana
THA.LOC104814403 Tarenaya hassleriana
Thecc.05G299600 Theobroma cacao
Thhalv10007193m.g Eutrema salsugineum
TPR.G11131 Trifolium pratense
TPR.G17657 Trifolium pratense
TPR.G20578 Trifolium pratense
TPR.G22617 Trifolium pratense
TPR.G23078 Trifolium pratense
TPR.G23111 Trifolium pratense
TPR.G40179 Trifolium pratense
TWI81G0890 Tripterygium wilfordii
unitig_21.g20505 Utricularia gibba
vmacro14143 Vaccinium macrocarpon
VMungo0331G0855 Vigna mungo
Zm00001eb400590 Zea mays

User provided reference genes

Program Settings