Gene: AT1G31870

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G31870
  • Transcript Identifier AT1G31870.2
  • Gene Type Coding gene
  • Location Chr1 : 11437269-11439821 : positive

Gene Family Information

  • ID HOM05D004380
  • #Genes/#Species 163/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G31870.2
  • uniprot Q9C6S8

Descriptions

  • Description pre-mRNA-splicing factor of RES complex protein
  • Computational description unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2050, pre-mRNA-splicing factor (InterPro:IPR018609); Has 13303 Blast hits to 9618 proteins in 489 species: Archae - 8; Bacteria - 444; Metazoa - 7153; Fungi - 2294; Plants - 942; Viruses - 128; Other Eukaryotes - 2334 (source: NCBI BLink).
  • Computational description unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2050, pre-mRNA-splicing factor (InterPro:IPR018609); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000398
IGI
IBA
Gene OntologymRNA splicing, via spliceosome1 2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003674
ND
Gene Ontologymolecular_function

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISM
Gene Ontologycytoplasm
GO:0005634
IDA
Gene Ontologynucleus2
GO:0005684
IBA
Gene OntologyU2-type spliceosomal complex1
GO:0070274
IBA
Gene OntologyRES complex1
GO:0005829
IDA
GOA Databasecytosol

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR018609 Bud13
Mapman id Description
16.2.5.2.10 RNA processing.pre-mRNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.component Bud13