Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p33470 Brassica napus
A07p02680 Brassica napus
A09p10100 Brassica napus
Aa31LG1G14750 Aethionema arabicum
Aa31LG6G13050 Aethionema arabicum
Aa31LG8G15170 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.4945 Anthoceros agrestis
Actinidia31002 Actinidia chinensis
Ah.02g124450 Amaranthus hybridus
AL3G51060 Arabidopsis lyrata
AL6G43540 Arabidopsis lyrata
AL8G45270 Arabidopsis lyrata
Aqoxy6G02302 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.H1V2NS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JA3WP2 Arachis hypogaea
AT2G17990 Arabidopsis thaliana
AT4G36105 Arabidopsis thaliana
AT5G66250 Arabidopsis thaliana
ATR0680G362 Amborella trichopoda
Atru.chr3.790 Acer truncatum
AUR62007522 Chenopodium quinoa
AUR62043756 Chenopodium quinoa
AUR62043805 Chenopodium quinoa
AUR62044201 Chenopodium quinoa
BcaB08g34783 Brassica carinata
BcaC06g36351 Brassica carinata
BcaNung04495 Brassica carinata
BcaNung04499 Brassica carinata
BolC3t18147H Brassica oleracea
BolC7t40899H Brassica oleracea
BolC9t54085H Brassica oleracea
BraA06t26280Z Brassica rapa
BraA07t28064Z Brassica rapa
BraA09t36653Z Brassica rapa
C03p58890 Brassica napus
C07p04980 Brassica napus
C09p11970 Brassica napus
CAN.G1671.6 Capsicum annuum
CAN.G893.6 Capsicum annuum
CANSAT01G1879 Cannabis sativa
CANSAT80G2154 Cannabis sativa
CARHR108480 Cardamine hirsuta
CARHR244500 Cardamine hirsuta
CARHR281470 Cardamine hirsuta
Carub.0003s3213 Capsella rubella
Carub.0007s0413 Capsella rubella
Carub.0008s2824 Capsella rubella
Ca_22369_v3 Cicer arietinum L.
Cc00_g26600 Coffea canephora
CDE02G4489 Ceratophyllum demersum
CDE04G1263 Ceratophyllum demersum
Cfa006964 Carpinus fangiana
Ciclev10025997m.g Citrus clementina
CiPaw.07G057700 Carya illinoinensis
CiPaw.08G132200 Carya illinoinensis
ClCG07G008590 Citrullus lanatus
COL.COLO4_21923 Corchorus olitorius
Cpa.g.sc6.238 Carica papaya
CsaV3_4G005560 Cucumis sativus L.
CSS0008566 Camellia sinensis var. sinensis
CSS0030027 Camellia sinensis var. sinensis
DCAR_016613 Daucus carota
Dinv33621 Davidia involucrata
Duzib147G0876 Durio zibethinus
Duzib187G1725 Durio zibethinus
Duzib264G0112 Durio zibethinus
ECA246G3074 Erigeron canadensis
EL10As8g23833 Beta vulgaris
Eucgr.J02426 Eucalyptus grandis
FAN19G0503 Fragaria x ananassa
FAN23G2041 Fragaria x ananassa
FAN26G0519 Fragaria x ananassa
FAN28G1062 Fragaria x ananassa
FvH4_1g11960 Fragaria vesca
Glyma.01G166700 Glycine max
Glyma.02G049100 Glycine max
Glyma.11G076600 Glycine max
Glyma.16G129200 Glycine max
Gohir.A02G170000 Gossypium hirsutum
Gohir.A11G176200 Gossypium hirsutum
Gohir.D03G010000 Gossypium hirsutum
Gohir.D11G183900 Gossypium hirsutum
Gorai.003G010300 Gossypium raimondii
Gorai.007G195800 Gossypium raimondii
GSVIVG01018794001 Vitis vinifera
HanXRQChr16g0531321 Helianthus annuus
Haze_03774 Corylus avellana
Hma1.2p1_0743F.1_g211570 Hydrangea macrophylla
Hma1.2p1_2281F.1_g318810 Hydrangea macrophylla
HPP92_007128 Vanilla planifolia
Hund16484 Selenicereus undatus
Lalb_Chr05g0229891 Lupinus albus
Lalb_Chr09g0321781 Lupinus albus
Lalb_Chr16g0377521 Lupinus albus
Lj2C466T13 Lonicera japonica
Lj2g0008453 Lotus japonicus
Lj4C217T16 Lonicera japonica
Lj4g0002557 Lotus japonicus
Lsat_1_v5_gn_4_146800 Lactuca sativa
Lsat_1_v5_gn_4_146821 Lactuca sativa
Manes.01G145100 Manihot esculenta
Manes.02G103600 Manihot esculenta
MBI05_g43883_MAGBIO Magnolia biondii
MD02G1133400 Malus domestica
MD15G1246600 Malus domestica
Medtr8g076020 Medicago truncatula
MELO3C016393.2 Cucumis melo
MSTRG.2705 Avicennia marina
Nitab4.5_0000438g0040 Nicotiana tabacum
Nitab4.5_0001959g0020 Nicotiana tabacum
Nitab4.5_0006119g0010 Nicotiana tabacum
Nitab4.5_0006286g0040 Nicotiana tabacum
Nn5g29330 Nelumbo nucifera
Nn6g32353 Nelumbo nucifera
Oeu005320.1 Olea europaea
Oeu035307.1 Olea europaea
Oeu048459.1 Olea europaea
Os06g0715400 Oryza sativa ssp. japonica
Peaxi162Scf00034g00264 Petunia axillaris
Peaxi162Scf00083g00714 Petunia axillaris
PGR119G1411 Punica granatum
PGSC0003DMG400003635 Solanum tuberosum
Phvul.002G109200 Phaseolus vulgaris
Phvul.003G262700 Phaseolus vulgaris
Potri.005G115500 Populus trichocarpa
Potri.007G012600 Populus trichocarpa
Prupe.7G167200 Prunus persica
Psat4g098560 Pisum sativum
Psat6g005760 Pisum sativum
PSO170G0469 Papaver somniferum
PSO700G0386 Papaver somniferum
QL06p033501 Quercus lobata
RcHm_v2.0_Chr2g0099581 Rosa chinensis
Rhsim08G0034200 Rhododendron simsii
Sabra05G0094600 Salix brachista
SalBow3G3323 Salvia bowleyana
Sc16g0002080 Simmondsia chinensis
Sed0027203 Sechium edule
SEGI_32707 Sequoiadendron giganteum
SGA_v2.0_scaffold137G35090 Striga asiatica
SMO358G0186 Selaginella moellendorffii
Solyc02g083990.3 Solanum lycopersicum
Solyc03g033580.3 Solanum lycopersicum
Sopen02g028790 Solanum pennellii
Sopen03g006360 Solanum pennellii
Sp2g30440 Schrenkiella parvula
Sp3g31420 Schrenkiella parvula
Sp7g33880 Schrenkiella parvula
TAR381G0830 Trochodendron aralioides
TAR628G0959 Trochodendron aralioides
THA.LOC104804260 Tarenaya hassleriana
THA.LOC104807492 Tarenaya hassleriana
Thecc.01G020200 Theobroma cacao
Thhalv10004494m.g Eutrema salsugineum
Thhalv10022777m.g Eutrema salsugineum
Thhalv10025665m.g Eutrema salsugineum
TPR.G30063 Trifolium pratense
TWI09G0584 Tripterygium wilfordii
TWI53G2031 Tripterygium wilfordii
unitig_699.g19710 Utricularia gibba
vmacro18418 Vaccinium macrocarpon
VMungo0251G1454 Vigna mungo
VMungo1215G1138 Vigna mungo
Zm00001eb228040 Zea mays

User provided reference genes

Program Settings