Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p15140 Brassica napus
Aa31LG3G9620 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.3239 Anthoceros agrestis
Actinidia08638 Actinidia chinensis
Actinidia34209 Actinidia chinensis
Ah.07g205860 Amaranthus hybridus
AL8G28160 Arabidopsis lyrata
Aqoxy5G04232 Aquilegia oxysepala
Aqoxy7G00099 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.A1ZC3A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HI2JIU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z6RGWR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZYZ79R Arachis hypogaea
AT5G53460 Arabidopsis thaliana
ATR0602G279 Amborella trichopoda
Atru.chr1.150 Acer truncatum
AUR62006114 Chenopodium quinoa
AUR62019375 Chenopodium quinoa
BcaC01g06255 Brassica carinata
BolC3t14177H Brassica oleracea
BraA03t10809Z Brassica rapa
C03p17640 Brassica napus
CAN.G108.62 Capsicum annuum
CAN.G303.50 Capsicum annuum
CAN.G348.16 Capsicum annuum
CANSAT21G0603 Cannabis sativa
CARHR266580 Cardamine hirsuta
Carub.0008s1362 Capsella rubella
Ca_12725_v3 Cicer arietinum L.
CBR_g18711 Chara braunii
CBR_g18717 Chara braunii
CBR_g18718 Chara braunii
CBR_g31844 Chara braunii
Cc02_g01700 Coffea canephora
CDE02G2166 Ceratophyllum demersum
CDE08G0285 Ceratophyllum demersum
CDE10G1071 Ceratophyllum demersum
CDE10G1303 Ceratophyllum demersum
Ciclev10004120m.g Citrus clementina
CiPaw.05G252100 Carya illinoinensis
CiPaw.06G009900 Carya illinoinensis
ClCG05G008840 Citrullus lanatus
COL.COLO4_03428 Corchorus olitorius
Cpa.g.sc3.65 Carica papaya
Cre13.g592200 Chlamydomonas reinhardtii
CsaV3_3G027930 Cucumis sativus L.
CSS0007758 Camellia sinensis var. sinensis
CSS0050330 Camellia sinensis var. sinensis
DCAR_008916 Daucus carota
DCAR_020316 Daucus carota
Dinv29294 Davidia involucrata
Dinv35322 Davidia involucrata
Duzib068G1332 Durio zibethinus
Duzib084G0325 Durio zibethinus
Duzib205G1094 Durio zibethinus
ECA232G2377 Erigeron canadensis
EL10Ac3g05303 Beta vulgaris
Eucgr.A01471 Eucalyptus grandis
Eucgr.L03008 Eucalyptus grandis
FAN01G1716 Fragaria x ananassa
FAN03G1831 Fragaria x ananassa
FAN06G0504 Fragaria x ananassa
FAN06G0708 Fragaria x ananassa
FAN10G1144 Fragaria x ananassa
FAN10G3586 Fragaria x ananassa
FvH4_7g31770 Fragaria vesca
Glyma.04G236900 Glycine max
Glyma.06G127400 Glycine max
Glyma.14G162300 Glycine max
Glyma.19G065600 Glycine max
Gohir.A05G414000 Gossypium hirsutum
Gohir.A08G095962 Gossypium hirsutum
Gohir.A12G250700 Gossypium hirsutum
Gohir.D12G251500 Gossypium hirsutum
Gorai.008G269600 Gossypium raimondii
GSVIVG01038714001 Vitis vinifera
HanXRQChr09g0253001 Helianthus annuus
HanXRQChr15g0493171 Helianthus annuus
Haze_00186 Corylus avellana
Haze_26266 Corylus avellana
Hma1.2p1_0538F.1_g174380 Hydrangea macrophylla
HPP92_008165 Vanilla planifolia
Hund04854 Selenicereus undatus
Hund11674 Selenicereus undatus
Lalb_Chr08g0240351 Lupinus albus
Lalb_Chr11g0066781 Lupinus albus
Lj1A1014G37 Lonicera japonica
Lj1A1014T43 Lonicera japonica
Lj1g0027622 Lotus japonicus
Lj3C907T3 Lonicera japonica
Lsat_1_v5_gn_9_58201 Lactuca sativa
Manes.06G159400 Manihot esculenta
Manes.14G006836 Manihot esculenta
Mapoly0002s0330 Marchantia polymorpha
MBI06_g08464_MAGBIO Magnolia biondii
MBI07_g07096_MAGBIO Magnolia biondii
MCO07G759 Micromonas commoda
MD01G1219500 Malus domestica
MD07G1290500 Malus domestica
Medtr1g027020 Medicago truncatula
MELO3C008481.2 Cucumis melo
Migut.F00228 Erythranthe guttata
Nitab4.5_0000714g0070 Nicotiana tabacum
Nitab4.5_0002492g0040 Nicotiana tabacum
Nn1g01871 Nelumbo nucifera
Nn3g19010 Nelumbo nucifera
Oeu041044.1 Olea europaea
Oeu041320.1 Olea europaea
Oeu041327.1 Olea europaea
Os01g0681900 Oryza sativa ssp. japonica
Os05g0555600 Oryza sativa ssp. japonica
Peaxi162Scf00550g00052 Petunia axillaris
PGR042G1482 Punica granatum
Phvul.001G076400 Phaseolus vulgaris
Phvul.009G053900 Phaseolus vulgaris
Potri.012G011700 Populus trichocarpa
Potri.015G017500 Populus trichocarpa
Pp3c10_8200 Physcomitrium patens
Pp3c14_8740 Physcomitrium patens
Pp3c16_19110 Physcomitrium patens
Pp3c5_20080 Physcomitrium patens
Prupe.2G311700 Prunus persica
Psat6g037200 Pisum sativum
PSO063G5383 Papaver somniferum
PSO170G0996 Papaver somniferum
QL09p009601 Quercus lobata
QL09p009608 Quercus lobata
RcHm_v2.0_Chr1g0381001 Rosa chinensis
Rhsim03G0207200 Rhododendron simsii
Rhsim03G0207700 Rhododendron simsii
Rhsim09G0205100 Rhododendron simsii
Sabra12G0018500 Salix brachista
Sabra15G0013400 Salix brachista
SalBow4G0367 Salvia bowleyana
SalBow4G2448 Salvia bowleyana
Sc13g0009760 Simmondsia chinensis
Sed0006803 Sechium edule
Sed0021586 Sechium edule
SEGI_17472 Sequoiadendron giganteum
SGA_v2.0_scaffold192G40562 Striga asiatica
SHI02382 Sapria himalayana
SMO302G0002 Selaginella moellendorffii
SMO302G0048 Selaginella moellendorffii
SMO353G0329 Selaginella moellendorffii
Solyc03g083440.4 Solanum lycopersicum
Sopen03g023210 Solanum pennellii
Sp6g15593 Schrenkiella parvula
TAR375G0916 Trochodendron aralioides
TAR375G0942 Trochodendron aralioides
TAR629G0032 Trochodendron aralioides
THA.LOC104811925 Tarenaya hassleriana
Thecc.03G195800 Theobroma cacao
Thhalv10012414m.g Eutrema salsugineum
TPR.G20023 Trifolium pratense
TWI14G0941 Tripterygium wilfordii
TWI23G0733 Tripterygium wilfordii
unitig_748.g8525 Utricularia gibba
unitig_748.g8526 Utricularia gibba
vmacro06543 Vaccinium macrocarpon
vmacro06546 Vaccinium macrocarpon
vmacro10115 Vaccinium macrocarpon
VMungo0647G1305 Vigna mungo
VMungo1309G1831 Vigna mungo
Zm00001eb156610 Zea mays
Zm00001eb295220 Zea mays
Zm00001eb360480 Zea mays

User provided reference genes

Program Settings