Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p01590 Brassica napus
Aa31LG10G2260 Aethionema arabicum
Actinidia01779 Actinidia chinensis
Ah.01g021130 Amaranthus hybridus
AL1G61100 Arabidopsis lyrata
Aqoxy7G01945 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.09PUMV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.65GG0R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.B5Y4IK Arachis hypogaea
AT1G52780 Arabidopsis thaliana
ATR0083G044 Amborella trichopoda
Atru.chr1.3171 Acer truncatum
AUR62011595 Chenopodium quinoa
AUR62016304 Chenopodium quinoa
AUR62016410 Chenopodium quinoa
AUR62022234 Chenopodium quinoa
AUR62031946 Chenopodium quinoa
AUR62031947 Chenopodium quinoa
BcaB07g33394 Brassica carinata
BcaC08g43459 Brassica carinata
BolC6t35916H Brassica oleracea
BraA06t23378Z Brassica rapa
C06p08330 Brassica napus
CAN.G438.98 Capsicum annuum
CANSAT56G0144 Cannabis sativa
CARHR042960 Cardamine hirsuta
Carub.0001s4187 Capsella rubella
Ca_07170_v3 Cicer arietinum L.
Cc09_g08320 Coffea canephora
Cc09_g08350 Coffea canephora
CDE01G0290 Ceratophyllum demersum
CDE02G1484 Ceratophyllum demersum
Cfa002035 Carpinus fangiana
Ciclev10010305m.g Citrus clementina
Ciclev10010489m.g Citrus clementina
Ciclev10010748m.g Citrus clementina
Ciclev10024778m.g Citrus clementina
CiPaw.01G242300 Carya illinoinensis
ClCG09G002500 Citrullus lanatus
COL.COLO4_12855 Corchorus olitorius
COL.COLO4_34965 Corchorus olitorius
COL.COLO4_34966 Corchorus olitorius
COL.COLO4_34968 Corchorus olitorius
COL.COLO4_34970 Corchorus olitorius
COL.COLO4_34971 Corchorus olitorius
COL.COLO4_35012 Corchorus olitorius
Cpa.g.sc10.197 Carica papaya
CsaV3_7G032830 Cucumis sativus L.
CSS0013629 Camellia sinensis var. sinensis
CSS0044472 Camellia sinensis var. sinensis
DCAR_016247 Daucus carota
DCAR_021324 Daucus carota
Dinv30549 Davidia involucrata
Dinv30550 Davidia involucrata
Dinv36589 Davidia involucrata
Dinv38073 Davidia involucrata
Dinv38074 Davidia involucrata
Duzib008G0003 Durio zibethinus
Duzib016G0002 Durio zibethinus
Duzib168G0223 Durio zibethinus
Duzib235G0948 Durio zibethinus
ECA236G0421 Erigeron canadensis
ECA236G2741 Erigeron canadensis
ECA247G3140 Erigeron canadensis
EL10Ac9g21967 Beta vulgaris
EL10As5g23553 Beta vulgaris
Eucgr.J03026 Eucalyptus grandis
FAN02G4155 Fragaria x ananassa
FAN05G3865 Fragaria x ananassa
FAN09G1065 Fragaria x ananassa
FAN14G3012 Fragaria x ananassa
FvH4_6g30720 Fragaria vesca
Glyma.06G212100 Glycine max
Glyma.07G033400 Glycine max
Glyma.08G208600 Glycine max
Gohir.A07G002700 Gossypium hirsutum
Gohir.A10G078100 Gossypium hirsutum
Gohir.D07G002950 Gossypium hirsutum
Gohir.D07G003000 Gossypium hirsutum
Gohir.D10G073400 Gossypium hirsutum
Gorai.001G002900 Gossypium raimondii
Gorai.001G003000 Gossypium raimondii
Gorai.011G079300 Gossypium raimondii
GSVIVG01017205001 Vitis vinifera
HanXRQChr04g0096371 Helianthus annuus
HanXRQChr14g0455571 Helianthus annuus
Haze_16483 Corylus avellana
Hma1.2p1_0018F.1_g013000 Hydrangea macrophylla
HPP92_021805 Vanilla planifolia
Lalb_Chr04g0262561 Lupinus albus
Lj3g0027440 Lotus japonicus
Lj5C65T7 Lonicera japonica
Lj5C65T8 Lonicera japonica
Lsat_1_v5_gn_1_33841 Lactuca sativa
Lsat_1_v5_gn_1_33920 Lactuca sativa
Lsat_1_v5_gn_8_94080 Lactuca sativa
Manes.04G119500 Manihot esculenta
Mapoly0017s0022 Marchantia polymorpha
Mapoly0017s0023 Marchantia polymorpha
Mapoly0121s0043 Marchantia polymorpha
MBI04_g43145_MAGBIO Magnolia biondii
MD09G1217000 Malus domestica
MD09G1217100 Malus domestica
MD17G1201100 Malus domestica
Medtr3g464360 Medicago truncatula
Medtr4g011610 Medicago truncatula
MELO3C023384.2 Cucumis melo
Migut.I00818 Erythranthe guttata
Migut.I00821 Erythranthe guttata
Migut.I00822 Erythranthe guttata
MSTRG.11103 Avicennia marina
Nitab4.5_0000410g0330 Nicotiana tabacum
Nitab4.5_0003751g0020 Nicotiana tabacum
Nn8g39324 Nelumbo nucifera
Oeu001148.1 Olea europaea
Oeu001149.3 Olea europaea
Os01g0176800 Oryza sativa ssp. japonica
Os07g0580700 Oryza sativa ssp. japonica
Os07g0580766 Oryza sativa ssp. japonica
Peaxi162Scf00015g00059 Petunia axillaris
Peaxi162Scf00034g00112 Petunia axillaris
PGR004G0126 Punica granatum
PGSC0003DMG400005615 Solanum tuberosum
PGSC0003DMG400028640 Solanum tuberosum
Phvul.009G199800 Phaseolus vulgaris
Phvul.010G152600 Phaseolus vulgaris
Potri.001G175600 Populus trichocarpa
Potri.006G187000 Populus trichocarpa
Prupe.3G076900 Prunus persica
Psat4g172640 Pisum sativum
PSO017G1888 Papaver somniferum
PSO170G5200 Papaver somniferum
QL05p026783 Quercus lobata
RcHm_v2.0_Chr2g0137111 Rosa chinensis
Sabra01G0136900 Salix brachista
Sabra06G0142000 Salix brachista
Sabra06G0182600 Salix brachista
SalBow2G1023 Salvia bowleyana
SalBow2G1894 Salvia bowleyana
Sc05g0000340 Simmondsia chinensis
Sc12g0009040 Simmondsia chinensis
Sc12g0009050 Simmondsia chinensis
Sc12g0009060 Simmondsia chinensis
Sc14g0002720 Simmondsia chinensis
Sc14g0002730 Simmondsia chinensis
Sed0005418 Sechium edule
Sed0020445 Sechium edule
SEGI_06654 Sequoiadendron giganteum
SEGI_27452 Sequoiadendron giganteum
SEGI_28548 Sequoiadendron giganteum
SMO180G0024 Selaginella moellendorffii
SMO340G0015 Selaginella moellendorffii
Solyc03g119920.1 Solanum lycopersicum
Solyc12g042960.3 Solanum lycopersicum
Sopen03g038800 Solanum pennellii
Sopen12g022140 Solanum pennellii
Sp1g39350 Schrenkiella parvula
TAR636G0233 Trochodendron aralioides
TAR636G0621 Trochodendron aralioides
TAR636G1811 Trochodendron aralioides
Thecc.06G077900 Theobroma cacao
Thecc.09G118100 Theobroma cacao
Thhalv10011203m.g Eutrema salsugineum
TPR.G38588 Trifolium pratense
TPR.G40708 Trifolium pratense
TWI12G0252 Tripterygium wilfordii
vmacro18947 Vaccinium macrocarpon
VMungo0331G0808 Vigna mungo
VMungo1383G1898 Vigna mungo
Zm00001eb122530 Zea mays

User provided reference genes

Program Settings