Gene: AT1G52780
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT1G52780
- Transcript Identifier AT1G52780.1
- Gene Type Coding gene
- Location Chr1 : 19658846-19662025 : positive
Gene Family Information
- ID HOM05D004028
- #Genes/#Species 174/89
- Phylogenetic origin
- ID ORTHO05D004844
- #Genes/#Species 170/88
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT1G52780.1
- uniprot F4IEK8
Descriptions
- Description PII, uridylyltransferase (DUF2921)
- Computational description Protein of unknown function (DUF2921); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: cultured cell, callus, leaf; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2921 (InterPro:IPR021319); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF2921) (TAIR:AT4G21700.1); Has 114 Blast hits to 99 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008150 | ND | Gene Ontology | biological_process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003674 | ND | Gene Ontology | molecular_function | |
| GO:0016779 | IEA | GOA Database | nucleotidyltransferase activity | |
| GO:0016740 | IEA | GOA Database | transferase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005576 | ISM | Gene Ontology | extracellular region | |
| GO:0005768 | IDA | GOA Database | endosome | |
| GO:0005768 | HDA | Gene Ontology | endosome | 1 |
| GO:0005794 | IDA | GOA Database | Golgi apparatus | |
| GO:0005794 | HDA | Gene Ontology | Golgi apparatus | 1 |
| GO:0005802 | IDA | GOA Database | trans-Golgi network | |
| GO:0005802 | HDA | Gene Ontology | trans-Golgi network | 1 |
| GO:0005634 | HDA | Gene Ontology | nucleus | 2 |
| GO:0043231 | IBA | Gene Ontology | intracellular membrane-bounded organelle | 3 |
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0016020 | IEA | GOA Database | membrane |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR021319 | Protein of unknown function DUF2921 |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |