Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p28290 Brassica napus
Aa31LG9G14610 Aethionema arabicum
Aa31sc49G50 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.1743 Anthoceros agrestis
Actinidia02863 Actinidia chinensis
Actinidia02866 Actinidia chinensis
Actinidia02867 Actinidia chinensis
Actinidia12245 Actinidia chinensis
Actinidia31395 Actinidia chinensis
Ah.05g174550 Amaranthus hybridus
AL6G41660 Arabidopsis lyrata
AL6G42680 Arabidopsis lyrata
AL6G42730 Arabidopsis lyrata
Aqoxy7G00682 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2VF8XD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.J17N2W Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.J6F3FE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V33WN8 Arachis hypogaea
AT4G08870 Arabidopsis thaliana
AT4G08900 Arabidopsis thaliana
ATR0665G432 Amborella trichopoda
Atru.chr5.282 Acer truncatum
Atru.chr5.284 Acer truncatum
AUR62004190 Chenopodium quinoa
AUR62013655 Chenopodium quinoa
BcaB01g02843 Brassica carinata
BcaC01g04748 Brassica carinata
BolC3t15731H Brassica oleracea
BraA03t12035Z Brassica rapa
C03p34220 Brassica napus
CAN.G112.16 Capsicum annuum
CAN.G23.23 Capsicum annuum
CAN.G388.33 Capsicum annuum
CANSAT56G0022 Cannabis sativa
CARHR259850 Cardamine hirsuta
Carub.0006s2736 Capsella rubella
Carub.0006s2738 Capsella rubella
Ca_19938_v3 Cicer arietinum L.
Ca_28979_v3 Cicer arietinum L.
CBR_g50887 Chara braunii
Cc02_g24110 Coffea canephora
CDE02G4314 Ceratophyllum demersum
CDE04G0300 Ceratophyllum demersum
Cfa023222 Carpinus fangiana
Cfa025533 Carpinus fangiana
Ciclev10021006m.g Citrus clementina
CiPaw.01G263900 Carya illinoinensis
CiPaw.02G169300 Carya illinoinensis
ClCG06G000480 Citrullus lanatus
COL.COLO4_24608 Corchorus olitorius
COL.COLO4_24610 Corchorus olitorius
Cpa.g.sc145.18 Carica papaya
CsaV3_6G006290 Cucumis sativus L.
CSS0002473 Camellia sinensis var. sinensis
CSS0015452 Camellia sinensis var. sinensis
CSS0042374 Camellia sinensis var. sinensis
DCAR_008551 Daucus carota
Dinv32365 Davidia involucrata
Dinv43690 Davidia involucrata
Duzib106G1980 Durio zibethinus
Duzib177G0253 Durio zibethinus
Duzib177G0443 Durio zibethinus
Duzib268G1605 Durio zibethinus
ECA234G2725 Erigeron canadensis
EL10Ac1g00868 Beta vulgaris
Eucgr.E01445 Eucalyptus grandis
FAN01G0081 Fragaria x ananassa
FAN03G2758 Fragaria x ananassa
FAN06G1729 Fragaria x ananassa
FAN06G4220 Fragaria x ananassa
FvH4_7g11450 Fragaria vesca
Glyma.01G140200 Glycine max
Glyma.03G028000 Glycine max
Glyma.17G131300 Glycine max
Gohir.A05G252466 Gossypium hirsutum
Gohir.A05G252532 Gossypium hirsutum
Gohir.D05G254400 Gossypium hirsutum
Gorai.009G265900 Gossypium raimondii
GSVIVG01027662001 Vitis vinifera
HanXRQChr16g0519941 Helianthus annuus
HanXRQChr16g0519961 Helianthus annuus
Haze_16793 Corylus avellana
Hma1.2p1_0375F.1_g138670 Hydrangea macrophylla
Hma1.2p1_0442F.1_g153860 Hydrangea macrophylla
HPP92_007375 Vanilla planifolia
Hund27368 Selenicereus undatus
Lalb_Chr12g0208141 Lupinus albus
Lj3g0002034 Lotus japonicus
Lj3g0008609 Lotus japonicus
Lj3g0012371 Lotus japonicus
Lj3g0015076 Lotus japonicus
Lj7A531T56 Lonicera japonica
Lsat_1_v5_gn_4_43080 Lactuca sativa
Manes.01G267300 Manihot esculenta
Manes.05G047100 Manihot esculenta
Mapoly0082s0038 Marchantia polymorpha
MBI04_g35670_MAGBIO Magnolia biondii
MCO07G634 Micromonas commoda
MD02G1206500 Malus domestica
MD02G1206600 Malus domestica
MD07G1119200 Malus domestica
Medtr0088s0100 Medicago truncatula
Medtr4g008810 Medicago truncatula
Medtr4g019730 Medicago truncatula
Medtr4g024940 Medicago truncatula
Medtr4g024960 Medicago truncatula
Medtr6g025055 Medicago truncatula
MELO3C022492.2 Cucumis melo
Migut.B01616 Erythranthe guttata
MSTRG.17174 Avicennia marina
Nitab4.5_0000457g0100 Nicotiana tabacum
Nitab4.5_0010616g0050 Nicotiana tabacum
Nn1g01122 Nelumbo nucifera
Oeu055504.4 Olea europaea
Os04g0106300 Oryza sativa ssp. japonica
Peaxi162Scf00013g03018 Petunia axillaris
PGR042G0702 Punica granatum
Phvul.010G081600 Phaseolus vulgaris
Potri.002G146200 Populus trichocarpa
Potri.014G067700 Populus trichocarpa
Pp3c5_2190 Physcomitrium patens
Pp3s30_709 Physcomitrium patens
Prupe.2G076400 Prunus persica
Prupe.2G142300 Prunus persica
Prupe.7G087800 Prunus persica
Psat0s13993g0040 Pisum sativum
Psat0s3070g0160 Pisum sativum
Psat6g217960 Pisum sativum
Psat6g218000 Pisum sativum
Psat6g218040 Pisum sativum
Psat6g218080 Pisum sativum
Psat6g218120 Pisum sativum
Psat7g231720 Pisum sativum
PSO478G0881 Papaver somniferum
PSO782G5694 Papaver somniferum
QL08p052832 Quercus lobata
RcHm_v2.0_Chr1g0349751 Rosa chinensis
RcHm_v2.0_Chr1g0349761 Rosa chinensis
RcHm_v2.0_Chr1g0349771 Rosa chinensis
Rhsim07G0029000 Rhododendron simsii
SalBow5G2819 Salvia bowleyana
Sc26g0001240 Simmondsia chinensis
Sc26g0001250 Simmondsia chinensis
Sc26g0001260 Simmondsia chinensis
Sc26g0001270 Simmondsia chinensis
Sed0016777 Sechium edule
Sed0023731 Sechium edule
SEGI_04392 Sequoiadendron giganteum
SEGI_09298 Sequoiadendron giganteum
SEGI_10460 Sequoiadendron giganteum
SGA_v2.0_scaffold11G05569 Striga asiatica
SGA_v2.0_scaffold153G36989 Striga asiatica
SHI13535 Sapria himalayana
SMO367G0287 Selaginella moellendorffii
Solyc01g091160.4 Solanum lycopersicum
Solyc01g091170.3 Solanum lycopersicum
Sopen01g036910 Solanum pennellii
Sopen01g036920 Solanum pennellii
Sp6g08900 Schrenkiella parvula
TAR375G0703 Trochodendron aralioides
THA.LOC104826515 Tarenaya hassleriana
Thecc.08G173500 Theobroma cacao
Thecc.08G173700 Theobroma cacao
Thhalv10028793m.g Eutrema salsugineum
TPR.G7597 Trifolium pratense
TPR.G7599 Trifolium pratense
TWI59G0845 Tripterygium wilfordii
unitig_899.g15094 Utricularia gibba
vmacro13417 Vaccinium macrocarpon
Zm00001eb418690 Zea mays

User provided reference genes

Program Settings