Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
AagrBONN_evm.TU.Sc2ySwM_340.327 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_340.331 Anthoceros agrestis
Actinidia16270 Actinidia chinensis
Actinidia17020 Actinidia chinensis
Aqoxy2G02302 Aquilegia oxysepala
Aqoxy2G02303 Aquilegia oxysepala
Aqoxy5G01089 Aquilegia oxysepala
Aqoxy5G01091 Aquilegia oxysepala
Aqoxy6G01662 Aquilegia oxysepala
Aqoxy6G01920 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.GGEE3T Arachis hypogaea
ATR0661G241 Amborella trichopoda
Atru.chr13.206 Acer truncatum
Atru.chr13.207 Acer truncatum
CAN.G20.32 Capsicum annuum
CAN.G311.82 Capsicum annuum
CAN.G637.1 Capsicum annuum
CAN.G637.4 Capsicum annuum
CANSAT25G3530 Cannabis sativa
Ca_15452_v3 Cicer arietinum L.
CDE02G0789 Ceratophyllum demersum
Cfa014016 Carpinus fangiana
Cfa026818 Carpinus fangiana
Ciclev10020253m.g Citrus clementina
Ciclev10031824m.g Citrus clementina
CiPaw.07G143000 Carya illinoinensis
ClCG08G013990 Citrullus lanatus
COL.COLO4_15291 Corchorus olitorius
COL.COLO4_15293 Corchorus olitorius
COL.COLO4_15294 Corchorus olitorius
COL.COLO4_24641 Corchorus olitorius
COL.COLO4_26076 Corchorus olitorius
Cre03.g159500 Chlamydomonas reinhardtii
Cre16.g683371 Chlamydomonas reinhardtii
CsaV3_2G024480 Cucumis sativus L.
CSS0003326 Camellia sinensis var. sinensis
CSS0015589 Camellia sinensis var. sinensis
CSS0030403 Camellia sinensis var. sinensis
CSS0037182 Camellia sinensis var. sinensis
Dinv31900 Davidia involucrata
Dinv31901 Davidia involucrata
Duzib093G0900 Durio zibethinus
Duzib116G0649 Durio zibethinus
Duzib177G0280 Durio zibethinus
Duzib177G0502 Durio zibethinus
FAN07G1093 Fragaria x ananassa
FAN12G0110 Fragaria x ananassa
FAN12G2492 Fragaria x ananassa
FAN12G3541 Fragaria x ananassa
FAN12G4190 Fragaria x ananassa
FAN17G0799 Fragaria x ananassa
FvH4_4g24730 Fragaria vesca
FvH4_4g24750 Fragaria vesca
FvH4_4g24751 Fragaria vesca
FvH4_4g27890 Fragaria vesca
Glyma.04G020200 Glycine max
Glyma.06G020300 Glycine max
Gohir.A11G254600 Gossypium hirsutum
Gohir.A11G254700 Gossypium hirsutum
Gohir.D11G264300 Gossypium hirsutum
Gohir.D11G264400 Gossypium hirsutum
Gorai.007G284300 Gossypium raimondii
Gorai.007G284400 Gossypium raimondii
GSVIVG01008730001 Vitis vinifera
GSVIVG01015446001 Vitis vinifera
GSVIVG01015447001 Vitis vinifera
Haze_22719 Corylus avellana
Hma1.2p1_0023F.1_g015830 Hydrangea macrophylla
Hma1.2p1_0023F.1_g015860 Hydrangea macrophylla
Hma1.2p1_0023F.1_g015870 Hydrangea macrophylla
Hma1.2p1_0028F.1_g017320 Hydrangea macrophylla
Lalb_Chr08g0246321 Lupinus albus
Lalb_Chr23g0265921 Lupinus albus
Lj1g0007451 Lotus japonicus
Manes.13G003000 Manihot esculenta
Manes.18G008900 Manihot esculenta
MBI05_g32275_MAGBIO Magnolia biondii
MBI09_g17152_MAGBIO Magnolia biondii
MBI18_g05694_MAGBIO Magnolia biondii
MCO05G310 Micromonas commoda
MD05G1034000 Malus domestica
MD05G1036600 Malus domestica
Medtr3g114870 Medicago truncatula
Medtr3g114890 Medicago truncatula
MELO3C011335.2 Cucumis melo
MSTRG.1142 Avicennia marina
Nitab4.5_0001180g0140 Nicotiana tabacum
Nitab4.5_0001270g0090 Nicotiana tabacum
Nitab4.5_0003280g0010 Nicotiana tabacum
Nitab4.5_0005973g0010 Nicotiana tabacum
Nn5g27925 Nelumbo nucifera
Nn5g27926 Nelumbo nucifera
Nn5g30856 Nelumbo nucifera
Nn7g37243 Nelumbo nucifera
Nn7g37247 Nelumbo nucifera
Os02g0482400 Oryza sativa ssp. japonica
Os09g0543400 Oryza sativa ssp. japonica
Peaxi162Scf00171g10044 Petunia axillaris
Peaxi162Scf00174g00105 Petunia axillaris
Peaxi162Scf00479g00072 Petunia axillaris
PGSC0003DMG400009959 Solanum tuberosum
PGSC0003DMG400024452 Solanum tuberosum
PGSC0003DMG400025628 Solanum tuberosum
PGSC0003DMG400031047 Solanum tuberosum
Phvul.009G020400 Phaseolus vulgaris
Phvul.009G020500 Phaseolus vulgaris
Potri.002G015800 Populus trichocarpa
Potri.005G246300 Populus trichocarpa
PRCOL_00001954 Prasinoderma coloniale
Prupe.8G044900 Prunus persica
Prupe.8G047700 Prunus persica
Prupe.8G048000 Prunus persica
Prupe.8G048200 Prunus persica
Psat0s1018g0040 Pisum sativum
PSO423G0267 Papaver somniferum
PSO541G4079 Papaver somniferum
PSO675G8915 Papaver somniferum
QL02p013034 Quercus lobata
QL02p013060 Quercus lobata
RcHm_v2.0_Chr3g0485801 Rosa chinensis
RcHm_v2.0_Chr3g0485811 Rosa chinensis
RcHm_v2.0_Chr3g0485831 Rosa chinensis
RcHm_v2.0_Chr3g0485901 Rosa chinensis
RcHm_v2.0_Chr3g0490321 Rosa chinensis
RcHm_v2.0_Chr3g0490331 Rosa chinensis
RcHm_v2.0_Chr4g0431831 Rosa chinensis
RcHm_v2.0_Chr7g0227121 Rosa chinensis
Rhsim06G0011400 Rhododendron simsii
Rhsim06G0011500 Rhododendron simsii
Sabra02G0012600 Salix brachista
Sabra05G0190400 Salix brachista
Sed0013676 Sechium edule
Sed0015343 Sechium edule
SEGI_03953 Sequoiadendron giganteum
SEGI_37656 Sequoiadendron giganteum
SMO171G0020 Selaginella moellendorffii
Solyc03g098300.1 Solanum lycopersicum
Solyc03g098310.1 Solanum lycopersicum
Solyc04g082030.1 Solanum lycopersicum
Sopen03g029010 Solanum pennellii
Sopen03g029020 Solanum pennellii
Sopen03g029030 Solanum pennellii
Sopen03g029040 Solanum pennellii
Sopen03g029050 Solanum pennellii
Sopen03g029060 Solanum pennellii
Sopen04g035680 Solanum pennellii
TAR091G0003 Trochodendron aralioides
TAR376G0337 Trochodendron aralioides
TAR627G0085 Trochodendron aralioides
TAR627G0362 Trochodendron aralioides
TAR628G1171 Trochodendron aralioides
Thecc.05G287700 Theobroma cacao
Thecc.05G287800 Theobroma cacao
Thecc.06G067400 Theobroma cacao
Thecc.08G052600 Theobroma cacao
Thecc.08G052700 Theobroma cacao
TPR.G27976 Trifolium pratense
TPR.G27977 Trifolium pratense
TPR.G30061 Trifolium pratense
TPR.G38148 Trifolium pratense
TPR.G38230 Trifolium pratense
TPR.G7712 Trifolium pratense
TWI12G0461 Tripterygium wilfordii
TWI56G0120 Tripterygium wilfordii
TWI56G0218 Tripterygium wilfordii
TWI56G1016 Tripterygium wilfordii
VMungo1309G0831 Vigna mungo
Zm00001eb114090 Zea mays
Zm00001eb319850 Zea mays
Zm00001eb331690 Zea mays

User provided reference genes

Program Settings