Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p34650 Brassica napus
A09p39530 Brassica napus
Aa31LG9G15770 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.3572 Anthoceros agrestis
Actinidia01247 Actinidia chinensis
Actinidia32793 Actinidia chinensis
Ah.02g115480 Amaranthus hybridus
AL1G45800 Arabidopsis lyrata
Aqoxy2G03914 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.C95Z0S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HVM0CV Arachis hypogaea
AT1G31730 Arabidopsis thaliana
ATR0069G035 Amborella trichopoda
Atru.chr8.2598 Acer truncatum
Atru.chr8.2611 Acer truncatum
Atru.chr8.2670 Acer truncatum
AUR62030758 Chenopodium quinoa
AUR62030759 Chenopodium quinoa
AUR62036405 Chenopodium quinoa
BcaB07g32818 Brassica carinata
BcaC05g26444 Brassica carinata
BcaC05g26656 Brassica carinata
BcaC05g27184 Brassica carinata
BolC5t31222H Brassica oleracea
BolC5t31815H Brassica oleracea
BraA09t38999Z Brassica rapa
BraA09t39452Z Brassica rapa
C05p24930 Brassica napus
C05p30850 Brassica napus
CAN.G998.9 Capsicum annuum
CANSAT35G1067 Cannabis sativa
CARHR031030 Cardamine hirsuta
Carub.0001s3003 Capsella rubella
Ca_22458_v3 Cicer arietinum L.
CBR_g31532 Chara braunii
Cc08_g05960 Coffea canephora
CDE02G1294 Ceratophyllum demersum
CDE06G0186 Ceratophyllum demersum
CDE06G2377 Ceratophyllum demersum
Cfa012306 Carpinus fangiana
Ciclev10010995m.g Citrus clementina
CiPaw.11G074100 Carya illinoinensis
CiPaw.12G055500 Carya illinoinensis
ClCG11G016100 Citrullus lanatus
COL.COLO4_16747 Corchorus olitorius
Cpa.g.sc1052.1 Carica papaya
Cpa.g.sc24.17 Carica papaya
Cre06.g310000 Chlamydomonas reinhardtii
CsaV3_4G014930 Cucumis sativus L.
CsaV3_UNG237520 Cucumis sativus L.
CSS0043960 Camellia sinensis var. sinensis
DCAR_004536 Daucus carota
Dinv37432 Davidia involucrata
Dinv41800 Davidia involucrata
Duzib068G0752 Durio zibethinus
Duzib205G0211 Durio zibethinus
ECA240G1531 Erigeron canadensis
ECA246G2658 Erigeron canadensis
EL10Ac5g12482 Beta vulgaris
Eucgr.E01151 Eucalyptus grandis
FAN04G0569 Fragaria x ananassa
FAN08G3498 Fragaria x ananassa
FAN13G0018 Fragaria x ananassa
FAN18G0585 Fragaria x ananassa
FAN18G2918 Fragaria x ananassa
FAN18G3633 Fragaria x ananassa
FAN18G4309 Fragaria x ananassa
FvH4_5g19200 Fragaria vesca
FvH4_5g25110 Fragaria vesca
Glyma.01G153200 Glycine max
Glyma.09G218500 Glycine max
Glyma.16G076500 Glycine max
Glyma.16G109200 Glycine max
Gohir.A08G148700 Gossypium hirsutum
Gohir.A12G201100 Gossypium hirsutum
Gohir.D08G169800 Gossypium hirsutum
Gohir.D12G203900 Gossypium hirsutum
Gorai.004G177000 Gossypium raimondii
Gorai.008G218700 Gossypium raimondii
GSVIVG01036887001 Vitis vinifera
HanXRQChr03g0084681 Helianthus annuus
HanXRQChr13g0412771 Helianthus annuus
Haze_08424 Corylus avellana
Hma1.2p1_0262F.1_g105380 Hydrangea macrophylla
Hma1.2p1_1991F.1_g310190 Hydrangea macrophylla
HPP92_006225 Vanilla planifolia
Hund10896 Selenicereus undatus
Hund14936 Selenicereus undatus
Lalb_Chr05g0215171 Lupinus albus
Lalb_Chr09g0325031 Lupinus albus
Lalb_Chr09g0325041 Lupinus albus
Lalb_Chr09g0325051 Lupinus albus
Lalb_Chr16g0380421 Lupinus albus
Lalb_Chr16g0380431 Lupinus albus
Lalb_Chr16g0391781 Lupinus albus
Lj4g0001871 Lotus japonicus
Lj8C361G1 Lonicera japonica
Lsat_1_v5_gn_3_20441 Lactuca sativa
Lsat_1_v5_gn_6_77000 Lactuca sativa
Manes.17G001200 Manihot esculenta
Mapoly0011s0004 Marchantia polymorpha
Mapoly0011s0005 Marchantia polymorpha
MBI07_g15664_MAGBIO Magnolia biondii
MCO16G352 Micromonas commoda
MD02G1267100 Malus domestica
MD07G1052000 Malus domestica
Medtr8g072250 Medicago truncatula
MELO3C010526.2 Cucumis melo
Migut.A00470 Erythranthe guttata
MSTRG.11858 Avicennia marina
MSTRG.13916 Avicennia marina
MSTRG.25749 Avicennia marina
Nitab4.5_0000986g0030 Nicotiana tabacum
Nitab4.5_0007507g0010 Nicotiana tabacum
Nn1g08153 Nelumbo nucifera
Oeu023055.1 Olea europaea
Oeu023056.3 Olea europaea
Oeu046773.1 Olea europaea
Os01g0916200 Oryza sativa ssp. japonica
Peaxi162Scf00053g00316 Petunia axillaris
PGR031G1573 Punica granatum
PGSC0003DMG400001953 Solanum tuberosum
Phvul.002G122300 Phaseolus vulgaris
Potri.004G235200 Populus trichocarpa
Pp3c12_14810 Physcomitrium patens
Pp3c12_18560 Physcomitrium patens
PRCOL_00000608 Prasinoderma coloniale
Prupe.2G018400 Prunus persica
Prupe.2G055800 Prunus persica
Prupe.2G056200 Prunus persica
Prupe.2G057700 Prunus persica
Prupe.2G068200 Prunus persica
Psat4g108000 Pisum sativum
PSO017G4228 Papaver somniferum
PSO063G0460 Papaver somniferum
QL12p003602 Quercus lobata
QL93p0143_0032 Quercus lobata
RcHm_v2.0_Chr4g0407221 Rosa chinensis
RcHm_v2.0_Chr7g0215311 Rosa chinensis
Rhsim11G0037600 Rhododendron simsii
Rhsim11G0037700 Rhododendron simsii
Sabra01G0179900 Salix brachista
SalBow4G0955 Salvia bowleyana
Sc22g0002840 Simmondsia chinensis
Sed0019322 Sechium edule
Sed0024593 Sechium edule
SEGI_21369 Sequoiadendron giganteum
SEGI_31789 Sequoiadendron giganteum
SEGI_41236 Sequoiadendron giganteum
SGA_v2.0_scaffold89G27371 Striga asiatica
SGA_v2.0_scaffold96G29109 Striga asiatica
SHI32765 Sapria himalayana
SMO117G0056 Selaginella moellendorffii
Solyc08g075310.4 Solanum lycopersicum
Sopen08g023910 Solanum pennellii
Sp1g27400 Schrenkiella parvula
TAR362G0882 Trochodendron aralioides
TAR636G3540 Trochodendron aralioides
THA.LOC104798531 Tarenaya hassleriana
THA.LOC104814388 Tarenaya hassleriana
Thecc.03G320400 Theobroma cacao
Thhalv10006719m.g Eutrema salsugineum
TPR.G14264 Trifolium pratense
TWI32G0464 Tripterygium wilfordii
TWI60G0350 Tripterygium wilfordii
vmacro00098 Vaccinium macrocarpon
VMungo1215G3448 Vigna mungo
Zm00001eb143480 Zea mays
Zm00001eb364820 Zea mays
Zm00001eb421670 Zea mays

User provided reference genes

Program Settings