Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p48910 Brassica napus
A08p24030 Brassica napus
Aa31LG6G16440 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.4149 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.4164 Anthoceros agrestis
Actinidia29167 Actinidia chinensis
Ah.01g022610 Amaranthus hybridus
AL7G10630 Arabidopsis lyrata
Aqoxy2G01068 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5454UR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6KB8MN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9L03M9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G8A5JV Arachis hypogaea
AT4G38760 Arabidopsis thaliana
ATR0810G267 Amborella trichopoda
AUR62010090 Chenopodium quinoa
AUR62013086 Chenopodium quinoa
AUR62040642 Chenopodium quinoa
BcaB03g12223 Brassica carinata
BcaNung01969 Brassica carinata
BolC7t46773H Brassica oleracea
BolC8t52466H Brassica oleracea
BraA06t27759Z Brassica rapa
C07p63600 Brassica napus
CAN.G603.1 Capsicum annuum
CAN.G603.2 Capsicum annuum
CANSAT25G3021 Cannabis sativa
CARHR053140 Cardamine hirsuta
CARHR053160 Cardamine hirsuta
CARHR294450 Cardamine hirsuta
Carub.0007s0061 Capsella rubella
Ca_19005_v3 Cicer arietinum L.
Ca_30033_v3 Cicer arietinum L.
CBR_g20234 Chara braunii
CBR_g5647 Chara braunii
Cc02_g16480 Coffea canephora
CDE05G0764 Ceratophyllum demersum
Cfa005187 Carpinus fangiana
Ciclev10027667m.g Citrus clementina
Ciclev10029869m.g Citrus clementina
CiPaw.06G125000 Carya illinoinensis
ClCG02G011550 Citrullus lanatus
ClCG02G011580 Citrullus lanatus
ClCG02G011590 Citrullus lanatus
ClCG02G011600 Citrullus lanatus
COL.COLO4_17260 Corchorus olitorius
COL.COLO4_17261 Corchorus olitorius
COL.COLO4_17262 Corchorus olitorius
Cpa.g.sc37.187 Carica papaya
Cpa.g.sc37.188 Carica papaya
CsaV3_2G015750 Cucumis sativus L.
CSS0003289 Camellia sinensis var. sinensis
CSS0008861 Camellia sinensis var. sinensis
CSS0014003 Camellia sinensis var. sinensis
CSS0015162 Camellia sinensis var. sinensis
CSS0024884 Camellia sinensis var. sinensis
DCAR_022780 Daucus carota
Dinv04965 Davidia involucrata
Duzib248G0147 Durio zibethinus
Duzib248G0615 Durio zibethinus
Duzib248G1214 Durio zibethinus
ECA234G0434 Erigeron canadensis
EL10Ac9g21435 Beta vulgaris
Eucgr.I01378 Eucalyptus grandis
FAN15G2714 Fragaria x ananassa
FAN20G3101 Fragaria x ananassa
FAN24G2945 Fragaria x ananassa
FAN27G1057 Fragaria x ananassa
FAN27G2584 Fragaria x ananassa
FvH4_2g01950 Fragaria vesca
Glyma.11G098551 Glycine max
Glyma.11G098600 Glycine max
Glyma.12G024600 Glycine max
Glyma.19G036450 Glycine max
Gohir.A12G039200 Gossypium hirsutum
Gohir.A12G039250 Gossypium hirsutum
Gohir.D12G033200 Gossypium hirsutum
Gorai.008G034000 Gossypium raimondii
GSVIVG01024075001 Vitis vinifera
HanXRQChr09g0252681 Helianthus annuus
HanXRQChr10g0299011 Helianthus annuus
Haze_02193 Corylus avellana
Haze_02194 Corylus avellana
Hma1.2p1_0032F.1_g019640 Hydrangea macrophylla
HPP92_005007 Vanilla planifolia
HPP92_005008 Vanilla planifolia
HPP92_005013 Vanilla planifolia
HPP92_005014 Vanilla planifolia
HPP92_005015 Vanilla planifolia
Hund00042 Selenicereus undatus
Lalb_Chr01g0001341 Lupinus albus
Lj3g0004699 Lotus japonicus
Lj3g0009405 Lotus japonicus
Lj5C184G3 Lonicera japonica
Lsat_1_v5_gn_4_74700 Lactuca sativa
Manes.04G077900 Manihot esculenta
Mapoly0001s0208 Marchantia polymorpha
MBI05_g07505_MAGBIO Magnolia biondii
MCO14G095 Micromonas commoda
MD05G1116500 Malus domestica
MD10G1119100 Malus domestica
MD10G1119400 Malus domestica
MD10G1119500 Malus domestica
MD10G1119600 Malus domestica
Medtr4g075330 Medicago truncatula
MELO3C020789.2 Cucumis melo
Migut.B00121 Erythranthe guttata
MSTRG.20018 Avicennia marina
Nitab4.5_0006590g0010 Nicotiana tabacum
Nitab4.5_0006590g0020 Nicotiana tabacum
Nitab4.5_0007580g0010 Nicotiana tabacum
Nn5g29099 Nelumbo nucifera
Oeu014463.1 Olea europaea
Os10g0154566 Oryza sativa ssp. japonica
Os10g0154600 Oryza sativa ssp. japonica
Peaxi162Scf00684g00023 Petunia axillaris
PGR142G1237 Punica granatum
PGSC0003DMG400022052 Solanum tuberosum
Phvul.011G026800 Phaseolus vulgaris
Potri.004G168700 Populus trichocarpa
Potri.009G130000 Populus trichocarpa
Pp3c5_12360 Physcomitrium patens
Prupe.8G161000 Prunus persica
Psat1g093160 Pisum sativum
Psat5g096880 Pisum sativum
Psat5g096920 Pisum sativum
Psat6g113120 Pisum sativum
Psat7g001600 Pisum sativum
Psat7g138160 Pisum sativum
PSO541G0713 Papaver somniferum
PSO675G3689 Papaver somniferum
QL11p047649 Quercus lobata
RcHm_v2.0_Chr6g0245151 Rosa chinensis
Rhsim05G0062900 Rhododendron simsii
Sabra04G0113100 Salix brachista
Sabra09G0099400 Salix brachista
Sc18g0006650 Simmondsia chinensis
Sed0006799 Sechium edule
SEGI_07180 Sequoiadendron giganteum
SEGI_16576 Sequoiadendron giganteum
SEGI_22139 Sequoiadendron giganteum
SEGI_22669 Sequoiadendron giganteum
SGA_v2.0_scaffold58G20427 Striga asiatica
SHI05691 Sapria himalayana
SHI05692 Sapria himalayana
SHI05695 Sapria himalayana
SHI05698 Sapria himalayana
SHI05699 Sapria himalayana
SHI05700 Sapria himalayana
SHI05701 Sapria himalayana
SMO171G0108 Selaginella moellendorffii
Solyc11g039880.2 Solanum lycopersicum
Solyc11g039890.2 Solanum lycopersicum
Sopen11g016530 Solanum pennellii
Sp7g37050 Schrenkiella parvula
TAR376G1212 Trochodendron aralioides
THA.LOC104824773 Tarenaya hassleriana
Thecc.02G066600 Theobroma cacao
Thhalv10024188m.g Eutrema salsugineum
TPR.G17192 Trifolium pratense
TPR.G30321 Trifolium pratense
TPR.G40846 Trifolium pratense
TWI79G0689 Tripterygium wilfordii
unitig_21.g20818 Utricularia gibba
vmacro02973 Vaccinium macrocarpon
vmacro17377 Vaccinium macrocarpon
vmacro17378 Vaccinium macrocarpon
VMungo0464G1786 Vigna mungo
VMungo1127G2122 Vigna mungo
Zm00001eb026650 Zea mays
Zm00001eb026660 Zea mays

User provided reference genes

Program Settings