Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p37380 Brassica napus
Aa31LG3G5570 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1074 Anthoceros agrestis
Actinidia01592 Actinidia chinensis
Actinidia17295 Actinidia chinensis
Actinidia38607 Actinidia chinensis
Ah.09g231540 Amaranthus hybridus
AL3G23550 Arabidopsis lyrata
Aqoxy2G01335 Aquilegia oxysepala
Aqoxy4G02829 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2N6KDB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5F6CY5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9W4D6L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BI8ZDZ Arachis hypogaea
AT3G11950 Arabidopsis thaliana
ATR0789G014 Amborella trichopoda
Atru.chr8.1223 Acer truncatum
AUR62025238 Chenopodium quinoa
AUR62028947 Chenopodium quinoa
BcaB04g18704 Brassica carinata
BcaB06g25559 Brassica carinata
BcaC05g29310 Brassica carinata
BolC3t16804H Brassica oleracea
BraA03t12899Z Brassica rapa
C03p45380 Brassica napus
C05p55990 Brassica napus
CAN.G186.36 Capsicum annuum
CANSAT54G1949 Cannabis sativa
CARHR086500 Cardamine hirsuta
Carub.0003s1128 Capsella rubella
Ca_00040_v3 Cicer arietinum L.
Ca_26442_v3 Cicer arietinum L.
CBR_g23522 Chara braunii
Cc09_g02090 Coffea canephora
CDE05G2486 Ceratophyllum demersum
Cfa006350 Carpinus fangiana
Ciclev10012217m.g Citrus clementina
CiPaw.09G025900 Carya illinoinensis
CiPaw.10G023500 Carya illinoinensis
ClCG04G000550 Citrullus lanatus
COL.COLO4_29438 Corchorus olitorius
Cpa.g.sc85.15 Carica papaya
Cre03.g201150 Chlamydomonas reinhardtii
CsaV3_4G031490 Cucumis sativus L.
CSS0019173 Camellia sinensis var. sinensis
CSS0040474 Camellia sinensis var. sinensis
DCAR_027450 Daucus carota
Dinv24029 Davidia involucrata
Dinv25026 Davidia involucrata
Duzib093G1597 Durio zibethinus
Duzib128G1936 Durio zibethinus
ECA234G4058 Erigeron canadensis
EL10Ac8g19073 Beta vulgaris
Eucgr.A02509 Eucalyptus grandis
FAN01G1629 Fragaria x ananassa
FAN06G3356 Fragaria x ananassa
FAN10G0630 Fragaria x ananassa
FvH4_7g05020 Fragaria vesca
Glyma.02G168400 Glycine max
Glyma.03G206500 Glycine max
Glyma.19G204100 Glycine max
Gohir.A01G136400 Gossypium hirsutum
Gohir.A09G130700 Gossypium hirsutum
Gohir.D01G123600 Gossypium hirsutum
Gohir.D09G126600 Gossypium hirsutum
Gorai.002G154600 Gossypium raimondii
Gorai.006G145500 Gossypium raimondii
GSVIVG01033426001 Vitis vinifera
HanXRQChr12g0359061 Helianthus annuus
Haze_04427 Corylus avellana
Haze_20079 Corylus avellana
Hma1.2p1_0516F.1_g170530 Hydrangea macrophylla
Hma1.2p1_0636F.1_g193240 Hydrangea macrophylla
HPP92_003796 Vanilla planifolia
HPP92_003821 Vanilla planifolia
HPP92_003822 Vanilla planifolia
HPP92_008306 Vanilla planifolia
Lalb_Chr01g0017651 Lupinus albus
Lalb_Chr20g0111111 Lupinus albus
Lalb_Chr25g0287681 Lupinus albus
Lj1A65T56 Lonicera japonica
Lj1g0012940 Lotus japonicus
Lj2A1153T47 Lonicera japonica
Lj5g0002775 Lotus japonicus
Lsat_1_v5_gn_2_66000 Lactuca sativa
Manes.08G039800 Manihot esculenta
Manes.09G040600 Manihot esculenta
Mapoly0057s0035 Marchantia polymorpha
MBI01_g21127_MAGBIO Magnolia biondii
MCO14G045 Micromonas commoda
MD02G1263700 Malus domestica
MD07G1054500 Malus domestica
Medtr1g054715 Medicago truncatula
Migut.C01187 Erythranthe guttata
MSTRG.26071 Avicennia marina
Nitab4.5_0000575g0240 Nicotiana tabacum
Nitab4.5_0000691g0150 Nicotiana tabacum
Nitab4.5_0000691g0180 Nicotiana tabacum
Nitab4.5_0007421g0010 Nicotiana tabacum
Nitab4.5_0008820g0010 Nicotiana tabacum
Nn2g14698 Nelumbo nucifera
Nn5g30627 Nelumbo nucifera
Oeu003219.1 Olea europaea
Oeu022105.1 Olea europaea
Oeu051191.1 Olea europaea
Os02g0605500 Oryza sativa ssp. japonica
Os04g0217900 Oryza sativa ssp. japonica
Os04g0218900 Oryza sativa ssp. japonica
Os05g0305200 Oryza sativa ssp. japonica
Os12g0181300 Oryza sativa ssp. japonica
Peaxi162Scf00072g00619 Petunia axillaris
Peaxi162Scf00195g00910 Petunia axillaris
PGR004G1046 Punica granatum
PGSC0003DMG400002212 Solanum tuberosum
PGSC0003DMG400016019 Solanum tuberosum
Phvul.001G200100 Phaseolus vulgaris
Phvul.007G262800 Phaseolus vulgaris
Potri.016G062900 Populus trichocarpa
Pp3c13_13880 Physcomitrium patens
Pp3c24_6130 Physcomitrium patens
PRCOL_00002048 Prasinoderma coloniale
Prupe.2G061200 Prunus persica
Psat1g222880 Pisum sativum
Psat6g110040 Pisum sativum
PSO384G1311 Papaver somniferum
PSO425G0018 Papaver somniferum
QL07p025600 Quercus lobata
RcHm_v2.0_Chr1g0331291 Rosa chinensis
RcHm_v2.0_Chr1g0331341 Rosa chinensis
RcHm_v2.0_Chr3g0486361 Rosa chinensis
RcHm_v2.0_Chr3g0486371 Rosa chinensis
RcHm_v2.0_Chr3g0486481 Rosa chinensis
Rhsim10G0079800 Rhododendron simsii
Sabra06G0151900 Salix brachista
Sabra16G0064900 Salix brachista
Sabra16G0065200 Salix brachista
Sabra16G0065500 Salix brachista
SalBow6G1870 Salvia bowleyana
Sc13g0002540 Simmondsia chinensis
Sed0004581 Sechium edule
SEGI_19220 Sequoiadendron giganteum
SGA_v2.0_scaffold274G46507 Striga asiatica
SHI28323 Sapria himalayana
SMO194G0050 Selaginella moellendorffii
SMO358G0316 Selaginella moellendorffii
SMO361G0253 Selaginella moellendorffii
Solyc04g009600.3 Solanum lycopersicum
Solyc04g049290.2 Solanum lycopersicum
Sopen04g004750 Solanum pennellii
Sopen04g019180 Solanum pennellii
Sp3g10170 Schrenkiella parvula
TAR375G0848 Trochodendron aralioides
TAR626G1779 Trochodendron aralioides
TAR633G2067 Trochodendron aralioides
TAR636G3394 Trochodendron aralioides
THA.LOC104799274 Tarenaya hassleriana
THA.LOC104826781 Tarenaya hassleriana
Thecc.05G180600 Theobroma cacao
Thhalv10020413m.g Eutrema salsugineum
TPR.G14497 Trifolium pratense
TPR.G2104 Trifolium pratense
TPR.G29255 Trifolium pratense
TWI74G1428 Tripterygium wilfordii
unitig_749.g14024 Utricularia gibba
vmacro05483 Vaccinium macrocarpon
vmacro22548 Vaccinium macrocarpon
VMungo0720G2154 Vigna mungo
VMungo1383G1884 Vigna mungo
Zm00001eb093630 Zea mays
Zm00001eb195790 Zea mays
Zm00001eb246660 Zea mays
Zm00001eb421970 Zea mays

User provided reference genes

Program Settings