Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p35540 Brassica napus
A05p40350 Brassica napus
Aa31LG11G7550 Aethionema arabicum
Aa31LG5G18440 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1190 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.2797 Anthoceros agrestis
Actinidia09766 Actinidia chinensis
Actinidia10785 Actinidia chinensis
Actinidia13723 Actinidia chinensis
Ah.01g001770 Amaranthus hybridus
Ah.14g082950 Amaranthus hybridus
AL3G19260 Arabidopsis lyrata
Aqoxy1G04067 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2N89KK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.4AD7TE Arachis hypogaea
AT3G07890 Arabidopsis thaliana
ATR0624G040 Amborella trichopoda
Atru.chr6.3316 Acer truncatum
Atru.chr6.3321 Acer truncatum
AUR62015097 Chenopodium quinoa
AUR62017557 Chenopodium quinoa
BcaB04g21266 Brassica carinata
BcaB06g26276 Brassica carinata
BcaB07g33766 Brassica carinata
BcaC05g29579 Brassica carinata
BcaC09g47956 Brassica carinata
BcaC09g47960 Brassica carinata
BolC1t05520H Brassica oleracea
BolC3t16587H Brassica oleracea
BolC5t34600H Brassica oleracea
BraA01t04354Z Brassica rapa
BraA03t12729Z Brassica rapa
C03p43180 Brassica napus
C05p59440 Brassica napus
CAN.G283.4 Capsicum annuum
CAN.G784.6 Capsicum annuum
CANSAT64G1437 Cannabis sativa
CARHR082620 Cardamine hirsuta
CARHR149210 Cardamine hirsuta
Carub.0003s0747 Capsella rubella
Ca_06477_v3 Cicer arietinum L.
CBR_g38652 Chara braunii
CBR_g38658 Chara braunii
Cc00_g04680 Coffea canephora
CDE04G0788 Ceratophyllum demersum
CDE07G2002 Ceratophyllum demersum
Cfa014281 Carpinus fangiana
Ciclev10015500m.g Citrus clementina
CiPaw.03G276000 Carya illinoinensis
CiPaw.04G193800 Carya illinoinensis
ClCG02G009550 Citrullus lanatus
COL.COLO4_35989 Corchorus olitorius
Cpa.g.sc132.75 Carica papaya
Cre10.g459800 Chlamydomonas reinhardtii
Cre17.g737050 Chlamydomonas reinhardtii
CsaV3_2G034270 Cucumis sativus L.
CSS0030501 Camellia sinensis var. sinensis
DCAR_012911 Daucus carota
DCAR_019723 Daucus carota
DCAR_021119 Daucus carota
Dinv05853 Davidia involucrata
Dinv07829 Davidia involucrata
Duzib133G0790 Durio zibethinus
Duzib138G0261 Durio zibethinus
Duzib211G0460 Durio zibethinus
ECA234G4445 Erigeron canadensis
ECA240G0316 Erigeron canadensis
EL10Ac3g05660 Beta vulgaris
Eucgr.A01077 Eucalyptus grandis
FAN02G0053 Fragaria x ananassa
FAN05G1989 Fragaria x ananassa
FAN09G2613 Fragaria x ananassa
FAN14G1132 Fragaria x ananassa
FAN14G5288 Fragaria x ananassa
FvH4_6g41560 Fragaria vesca
Glyma.02G308000 Glycine max
Glyma.14G005100 Glycine max
Gohir.A07G086000 Gossypium hirsutum
Gohir.A07G177200 Gossypium hirsutum
Gohir.A07G189100 Gossypium hirsutum
Gohir.D07G091100 Gossypium hirsutum
Gohir.D07G174000 Gossypium hirsutum
Gohir.D07G195480 Gossypium hirsutum
Gorai.001G097600 Gossypium raimondii
Gorai.001G194500 Gossypium raimondii
Gorai.001G218800 Gossypium raimondii
GSVIVG01030412001 Vitis vinifera
HanXRQChr02g0038481 Helianthus annuus
HanXRQChr10g0306321 Helianthus annuus
Haze_12726 Corylus avellana
Hma1.2p1_0133F.1_g060960 Hydrangea macrophylla
HPP92_007481 Vanilla planifolia
Hund24165 Selenicereus undatus
Lalb_Chr04g0247141 Lupinus albus
Lalb_Chr10g0107631 Lupinus albus
Lalb_Chr17g0349271 Lupinus albus
Lj8A132T53 Lonicera japonica
LjContig00081g0006770 Lotus japonicus
Lsat_1_v5_gn_5_124761 Lactuca sativa
Lsat_1_v5_gn_9_105400 Lactuca sativa
Manes.12G060701 Manihot esculenta
Manes.13G063955 Manihot esculenta
Mapoly0028s0025 Marchantia polymorpha
MCO11G755 Micromonas commoda
MD09G1118900 Malus domestica
MD17G1109700 Malus domestica
Medtr5g098140 Medicago truncatula
MELO3C004919.2 Cucumis melo
MELO3C013431.2 Cucumis melo
MELO3C019359.2 Cucumis melo
Migut.H01294 Erythranthe guttata
Migut.M00008 Erythranthe guttata
MSTRG.14934 Avicennia marina
Nitab4.5_0000130g0190 Nicotiana tabacum
Nitab4.5_0000622g0220 Nicotiana tabacum
Nitab4.5_0007644g0020 Nicotiana tabacum
Nitab4.5_0008746g0040 Nicotiana tabacum
Nn1g03312 Nelumbo nucifera
Nn1g07381 Nelumbo nucifera
Oeu029810.1 Olea europaea
Oeu046888.2 Olea europaea
Os08g0337700 Oryza sativa ssp. japonica
Peaxi162Scf00047g01920 Petunia axillaris
Peaxi162Scf01333g00145 Petunia axillaris
PGR042G0445 Punica granatum
PGSC0003DMG400006427 Solanum tuberosum
PGSC0003DMG400013895 Solanum tuberosum
Phvul.008G287900 Phaseolus vulgaris
Potri.002G218100 Populus trichocarpa
Potri.014G163400 Populus trichocarpa
Pp3c18_4400 Physcomitrium patens
Pp3c19_14290 Physcomitrium patens
Pp3c19_14410 Physcomitrium patens
Pp3c5_25800 Physcomitrium patens
Prupe.3G205400 Prunus persica
Psat2g003600 Pisum sativum
PSO210G7478 Papaver somniferum
PSO302G0292 Papaver somniferum
QL08p029678 Quercus lobata
RcHm_v2.0_Chr2g0094461 Rosa chinensis
RcHm_v2.0_Chr2g0157241 Rosa chinensis
Rhsim04G0046000 Rhododendron simsii
Rhsim06G0171200 Rhododendron simsii
Sabra02G0170400 Salix brachista
Sabra14G0124700 Salix brachista
SalBow7G4161 Salvia bowleyana
Sc20g0003830 Simmondsia chinensis
Sed0010697 Sechium edule
Sed0018007 Sechium edule
SEGI_35068 Sequoiadendron giganteum
SGA_v2.0_scaffold49G18419 Striga asiatica
SMO203G0129 Selaginella moellendorffii
SMO364G0507 Selaginella moellendorffii
Solyc07g049580.3 Solanum lycopersicum
Solyc12g005930.2 Solanum lycopersicum
Sopen07g024980 Solanum pennellii
Sopen12g001880 Solanum pennellii
Sp3g06810 Schrenkiella parvula
TAR626G1600 Trochodendron aralioides
TAR627G0952 Trochodendron aralioides
THA.LOC104809868 Tarenaya hassleriana
THA.LOC104819052 Tarenaya hassleriana
Thecc.01G186500 Theobroma cacao
Thhalv10020959m.g Eutrema salsugineum
TPR.G15072 Trifolium pratense
TPR.G18802 Trifolium pratense
TWI18G1165 Tripterygium wilfordii
TWI75G1692 Tripterygium wilfordii
unitig_52.g17314 Utricularia gibba
vmacro09378 Vaccinium macrocarpon
vmacro12135 Vaccinium macrocarpon
VMungo0647G2114 Vigna mungo
Zm00001eb176770 Zea mays

User provided reference genes

Program Settings