Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p15970 Brassica napus
A07p35920 Brassica napus
Aa31LG10G5170 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1845 Anthoceros agrestis
Actinidia06664 Actinidia chinensis
Actinidia09819 Actinidia chinensis
Ah.15g092910 Amaranthus hybridus
AL5G17190 Arabidopsis lyrata
Aqoxy1G00632 Aquilegia oxysepala
Aqoxy5G02121 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2GFV1T Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9E66QM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H83BDD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IAY1GN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JRXR5K Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KN16SD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RLN2F0 Arachis hypogaea
AT3G27740 Arabidopsis thaliana
ATR0787G147 Amborella trichopoda
Atru.chr4.2901 Acer truncatum
Atru.chr4.649 Acer truncatum
AUR62010627 Chenopodium quinoa
AUR62017270 Chenopodium quinoa
BcaB03g14725 Brassica carinata
BcaB05g24461 Brassica carinata
BcaC03g15094 Brassica carinata
BcaC08g46397 Brassica carinata
BolC2t08726H Brassica oleracea
BolC6t39404H Brassica oleracea
BraA02t06656Z Brassica rapa
BraA07t31175Z Brassica rapa
C02p26550 Brassica napus
C06p43290 Brassica napus
CAN.G1241.25 Capsicum annuum
CAN.G479.50 Capsicum annuum
CANSAT01G2639 Cannabis sativa
CARHR038270 Cardamine hirsuta
Carub.0005s0630 Capsella rubella
Ca_16915_v3 Cicer arietinum L.
CBR_g8394 Chara braunii
Cc07_g17390 Coffea canephora
CDE02G3666 Ceratophyllum demersum
CDE09G1207 Ceratophyllum demersum
Cfa002865 Carpinus fangiana
Cfa021606 Carpinus fangiana
Ciclev10025660m.g Citrus clementina
CiPaw.03G124200 Carya illinoinensis
ClCG11G013120 Citrullus lanatus
COL.COLO4_22427 Corchorus olitorius
Cpa.g.sc42.92 Carica papaya
Cre06.g308500 Chlamydomonas reinhardtii
CsaV3_5G029640 Cucumis sativus L.
CSS0003432 Camellia sinensis var. sinensis
CSS0004755 Camellia sinensis var. sinensis
DCAR_014347 Daucus carota
Dinv05184 Davidia involucrata
Dinv09929 Davidia involucrata
Duzib187G0686 Durio zibethinus
Duzib187G1293 Durio zibethinus
Duzib264G0672 Durio zibethinus
ECA246G0381 Erigeron canadensis
EL10Ac4g10006 Beta vulgaris
EL10Ac7g16883 Beta vulgaris
Eucgr.I00242 Eucalyptus grandis
FAN08G0734 Fragaria x ananassa
FAN11G0854 Fragaria x ananassa
FAN13G0594 Fragaria x ananassa
FAN16G1056 Fragaria x ananassa
FAN18G2098 Fragaria x ananassa
FAN21G2117 Fragaria x ananassa
FAN25G1759 Fragaria x ananassa
FvH4_3g43670 Fragaria vesca
FvH4_5g29030 Fragaria vesca
Glyma.04G216000 Glycine max
Glyma.05G188500 Glycine max
Glyma.06G150000 Glycine max
Gohir.A11G054600 Gossypium hirsutum
Gohir.A11G227533 Gossypium hirsutum
Gohir.D11G058200 Gossypium hirsutum
Gohir.D11G231200 Gossypium hirsutum
Gorai.003G069700 Gossypium raimondii
Gorai.007G063500 Gossypium raimondii
GSVIVG01026584001 Vitis vinifera
HanXRQChr05g0132711 Helianthus annuus
HanXRQChr16g0507191 Helianthus annuus
Haze_25183 Corylus avellana
Haze_27195 Corylus avellana
Haze_27203 Corylus avellana
Hma1.2p1_0252F.1_g102755 Hydrangea macrophylla
Hma1.2p1_0975F.1_g243110 Hydrangea macrophylla
Hma1.2p1_1882F.1_g306410 Hydrangea macrophylla
HPP92_024507 Vanilla planifolia
HPP92_024510 Vanilla planifolia
Hund00470 Selenicereus undatus
Lalb_Chr12g0203311 Lupinus albus
Lalb_Chr13g0296421 Lupinus albus
Lj1g0021659 Lotus japonicus
Lj4A856T33 Lonicera japonica
Lsat_1_v5_gn_0_41420 Lactuca sativa
Lsat_1_v5_gn_2_115701 Lactuca sativa
Lsat_1_v5_gn_8_97760 Lactuca sativa
Manes.13G086500 Manihot esculenta
Mapoly0008s0155 Marchantia polymorpha
MBI07_g22390_MAGBIO Magnolia biondii
MCO05G701 Micromonas commoda
MD03G1020600 Malus domestica
MD11G1021800 Malus domestica
MD15G1342400 Malus domestica
MD15G1342500 Malus domestica
Medtr3g095490 Medicago truncatula
Medtr4g103830 Medicago truncatula
MELO3C011808.2 Cucumis melo
Migut.H01123 Erythranthe guttata
MSTRG.2686 Avicennia marina
Nitab4.5_0000540g0290 Nicotiana tabacum
Nitab4.5_0002388g0110 Nicotiana tabacum
Nitab4.5_0008523g0020 Nicotiana tabacum
Nn5g28719 Nelumbo nucifera
Nn5g28720 Nelumbo nucifera
Nn7g38167 Nelumbo nucifera
Oeu037781.1 Olea europaea
Oeu047648.2 Olea europaea
Os02g0708100 Oryza sativa ssp. japonica
Peaxi162Scf00025g02016 Petunia axillaris
Peaxi162Scf00498g00315 Petunia axillaris
PGR142G4345 Punica granatum
PGSC0003DMG400000337 Solanum tuberosum
PGSC0003DMG401024557 Solanum tuberosum
Phvul.009G147600 Phaseolus vulgaris
Potri.001G153400 Populus trichocarpa
Potri.003G080900 Populus trichocarpa
Pp3c11_11760 Physcomitrium patens
Pp3c7_8810 Physcomitrium patens
PRCOL_00005740 Prasinoderma coloniale
Prupe.6G016000 Prunus persica
Prupe.6G163300 Prunus persica
Psat5g063800 Pisum sativum
PSO017G1739 Papaver somniferum
PSO063G2422 Papaver somniferum
PSO170G5654 Papaver somniferum
PSO675G1326 Papaver somniferum
QL06p051895 Quercus lobata
QL10p011683 Quercus lobata
RcHm_v2.0_Chr2g0150151 Rosa chinensis
RcHm_v2.0_Chr5g0078331 Rosa chinensis
Sabra01G0123200 Salix brachista
Sabra03G0052100 Salix brachista
SalBow5G2472 Salvia bowleyana
SalBow5G4447 Salvia bowleyana
Sc25g0003300 Simmondsia chinensis
Sed0000423 Sechium edule
Sed0005502 Sechium edule
Sed0026112 Sechium edule
SEGI_05555 Sequoiadendron giganteum
SEGI_39075 Sequoiadendron giganteum
SGA_v2.0_scaffold34G13603 Striga asiatica
SGA_v2.0_scaffold47G17755 Striga asiatica
SMO164G0151 Selaginella moellendorffii
SMO292G0005 Selaginella moellendorffii
Solyc03g115630.3 Solanum lycopersicum
Sopen03g034620 Solanum pennellii
Sopen10g006850 Solanum pennellii
Sp5g24680 Schrenkiella parvula
TAR625G1071 Trochodendron aralioides
THA.LOC104820363 Tarenaya hassleriana
Thecc.01G121700 Theobroma cacao
Thhalv10018601m.g Eutrema salsugineum
TPR.G18713 Trifolium pratense
TPR.G3506 Trifolium pratense
TWI79G1638 Tripterygium wilfordii
unitig_699.g19714 Utricularia gibba
vmacro18661 Vaccinium macrocarpon
vmacro21315 Vaccinium macrocarpon
VMungo0251G2586 Vigna mungo
VMungo1309G1400 Vigna mungo
Zm00001eb188530 Zea mays
Zm00001eb252240 Zea mays

User provided reference genes

Program Settings