Gene: PGR142G4345
General Information
Structural Information
- Species Punica granatum
- Gene Identifier PGR142G4345
- Transcript Identifier PGR142G4345.03
- Gene Type Coding gene
- Location NC_045128.1 : 11878892-11881491 : positive
Gene Family Information
- ID HOM05D003754
- #Genes/#Species 183/98
- Phylogenetic origin
- ID ORTHO05D004530
- #Genes/#Species 177/98
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- pid XP_031382897.1
- name LOC116197033
- name XM_031527037.1
- id gene-LOC116197033
- uniprot A0A218XHV3
Descriptions
- product carbamoyl-phosphate synthase small chain, chloroplastic, transcript variant X3
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006207 | IEA | GOA Database | 'de novo' pyrimidine nucleobase biosynthetic process | |
| GO:0006207 | IEA | InterPro | 'de novo' pyrimidine nucleobase biosynthetic process | |
| GO:0006541 | IEA | GOA Database | glutamine metabolic process | |
| GO:0006541 | IEA | InterPro | glutamine metabolic process | |
| GO:0016036 | ISO | PLAZA Integrative Orthology | cellular response to phosphate starvation | AT3G27740 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004088 | IEA | GOA Database | carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity | |
| GO:0004088 | IEA | InterPro | carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009570 | ISO | PLAZA Integrative Orthology | chloroplast stroma | AT3G27740 |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT3G27740 |
| GO:0005951 | ISO | PLAZA Integrative Orthology | carbamoyl-phosphate synthase complex | AT3G27740 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR029062 | Class I glutamine amidotransferase-like |
| IPR006274 | Carbamoyl-phosphate synthase, small subunit |
| IPR035686 | Carbamoyl-phosphate synthase small subunit, GATase1 domain |
| IPR017926 | Glutamine amidotransferase |
| IPR036480 | Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily |
| IPR002474 | Carbamoyl-phosphate synthase small subunit, N-terminal domain |
| Mapman id | Description |
|---|---|
| 4.1.1.1.2.1.2 | Amino acid metabolism.biosynthesis.glutamate family.glutamate-derived amino acids.arginine.carbamoyl phosphate synthetase heterodimer.small subunit |
| 6.2.1.1.2 | Nucleotide metabolism.pyrimidines.de novo biosynthesis.carbamoyl phosphate synthetase heterodimer.small subunit |