Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p29770 Brassica napus
A03p53530 Brassica napus
A04p16410 Brassica napus
A06p03980 Brassica napus
Aa31LG10G4900 Aethionema arabicum
Aa31LG5G11570 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.2777 Anthoceros agrestis
Actinidia31020 Actinidia chinensis
Ah.02g115340 Amaranthus hybridus
Ah.11g044930 Amaranthus hybridus
AL1G55920 Arabidopsis lyrata
Aqoxy3G00338 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.8SD58P Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9P0TZR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.A9KR6W Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DGVF5A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KRT5WL Arachis hypogaea
AT1G49040 Arabidopsis thaliana
ATR0322G035 Amborella trichopoda
Atru.chr9.806 Acer truncatum
AUR62025881 Chenopodium quinoa
AUR62025889 Chenopodium quinoa
AUR62029853 Chenopodium quinoa
AUR62029854 Chenopodium quinoa
AUR62043128 Chenopodium quinoa
AUR62043749 Chenopodium quinoa
BcaB04g17498 Brassica carinata
BcaB07g33695 Brassica carinata
BcaC06g31146 Brassica carinata
BcaC08g43116 Brassica carinata
BolC6t35520H Brassica oleracea
BolC7t43935H Brassica oleracea
BolC7t43936H Brassica oleracea
BolC7t43938H Brassica oleracea
BolC7t43947H Brassica oleracea
BolC7t43948H Brassica oleracea
BolC7t43949H Brassica oleracea
BraA01t03104Z Brassica rapa
BraA03t14419Z Brassica rapa
BraA06t23606Z Brassica rapa
C06p03880 Brassica napus
C06p38310 Brassica napus
C07p34210 Brassica napus
CAN.G438.128 Capsicum annuum
CANSAT80G0780 Cannabis sativa
CARHR039080 Cardamine hirsuta
Carub.0001s3822 Capsella rubella
Ca_25453_v3 Cicer arietinum L.
CBR_g37927 Chara braunii
Cc04_g07270 Coffea canephora
CDE01G0336 Ceratophyllum demersum
Cfa019795 Carpinus fangiana
Cfa022435 Carpinus fangiana
Ciclev10018557m.g Citrus clementina
CiPaw.15G128600 Carya illinoinensis
CiPaw.16G085300 Carya illinoinensis
ClCG04G011210 Citrullus lanatus
COL.COLO4_00775 Corchorus olitorius
COL.COLO4_16279 Corchorus olitorius
COL.COLO4_16280 Corchorus olitorius
Cpa.g.sc13.14 Carica papaya
Cpa.g.sc13.18 Carica papaya
Cre07.g352900 Chlamydomonas reinhardtii
Cre12.g511600 Chlamydomonas reinhardtii
CsaV3_1G006540 Cucumis sativus L.
CSS0000649 Camellia sinensis var. sinensis
DCAR_027817 Daucus carota
Dinv07347 Davidia involucrata
Dinv40419 Davidia involucrata
Duzib068G0584 Durio zibethinus
Duzib084G0296 Durio zibethinus
ECA233G5984 Erigeron canadensis
EL10Ac5g11428 Beta vulgaris
EL10Ac5g11429 Beta vulgaris
Eucgr.B00711 Eucalyptus grandis
FAN04G2437 Fragaria x ananassa
FAN08G0427 Fragaria x ananassa
FAN18G1500 Fragaria x ananassa
FAN18G1748 Fragaria x ananassa
FAN18G2189 Fragaria x ananassa
FAN18G2253 Fragaria x ananassa
FAN18G2555 Fragaria x ananassa
FvH4_5g12360 Fragaria vesca
FvH4_5g12390 Fragaria vesca
FvH4_5g12410 Fragaria vesca
FvH4_5g12450 Fragaria vesca
Glyma.05G233100 Glycine max
Glyma.08G040500 Glycine max
Gohir.A09G177800 Gossypium hirsutum
Gohir.D09G173300 Gossypium hirsutum
Gorai.006G195200 Gossypium raimondii
GSVIVG01008260001 Vitis vinifera
HanXRQChr02g0044981 Helianthus annuus
HanXRQChr10g0292041 Helianthus annuus
HanXRQChr17g0558431 Helianthus annuus
Haze_05981 Corylus avellana
Haze_16262 Corylus avellana
Haze_18649 Corylus avellana
Haze_18651 Corylus avellana
Haze_18652 Corylus avellana
Haze_18653 Corylus avellana
Hma1.2p1_1001F.1_g246600 Hydrangea macrophylla
Hma1.2p1_1001F.1_g246610 Hydrangea macrophylla
HPP92_022912 Vanilla planifolia
Lalb_Chr05g0222571 Lupinus albus
Lj4g0007480 Lotus japonicus
Lj5C147T4 Lonicera japonica
Lsat_1_v5_gn_8_146581 Lactuca sativa
Manes.01G013600 Manihot esculenta
Mapoly0058s0028 Marchantia polymorpha
MBI04_g31736_MAGBIO Magnolia biondii
MBI04_g36311_MAGBIO Magnolia biondii
MBI04_g48188_MAGBIO Magnolia biondii
MCO01G197 Micromonas commoda
MCO16G541 Micromonas commoda
MD06G1213100 Malus domestica
MD06G1214100 Malus domestica
MD14G1224200 Malus domestica
Medtr8g104010 Medicago truncatula
MELO3C002081.2 Cucumis melo
Migut.D01465 Erythranthe guttata
MSTRG.9273 Avicennia marina
Nitab4.5_0001599g0030 Nicotiana tabacum
Nitab4.5_0004412g0040 Nicotiana tabacum
Nn4g23791 Nelumbo nucifera
Oeu010078.1 Olea europaea
Oeu011132.2 Olea europaea
Oeu011163.2 Olea europaea
Os01g0575500 Oryza sativa ssp. japonica
Peaxi162Scf00015g00841 Petunia axillaris
PGR083G2820 Punica granatum
Phvul.002G315300 Phaseolus vulgaris
Potri.012G060800 Populus trichocarpa
Potri.015G049500 Populus trichocarpa
Pp3c26_9700 Physcomitrium patens
PRCOL_00000007 Prasinoderma coloniale
Prupe.5G219600 Prunus persica
Psat7g009720 Pisum sativum
Psat7g012640 Pisum sativum
Psat7g012720 Pisum sativum
PSO017G1990 Papaver somniferum
PSO478G4026 Papaver somniferum
QL04p048687 Quercus lobata
QL10p023927 Quercus lobata
QL10p023951 Quercus lobata
QL10p023978 Quercus lobata
RcHm_v2.0_Chr2g0150541 Rosa chinensis
RcHm_v2.0_Chr3g0491251 Rosa chinensis
RcHm_v2.0_Chr5g0051881 Rosa chinensis
RcHm_v2.0_Chr5g0051891 Rosa chinensis
RcHm_v2.0_Chr7g0185021 Rosa chinensis
Rhsim08G0135600 Rhododendron simsii
Sabra12G0044000 Salix brachista
SalBow1G2916 Salvia bowleyana
Sc10g0009500 Simmondsia chinensis
Sed0003499 Sechium edule
SEGI_15664 Sequoiadendron giganteum
SGA_v2.0_scaffold612G53192 Striga asiatica
SHI30399 Sapria himalayana
SHI30400 Sapria himalayana
SMO228G0026 Selaginella moellendorffii
Solyc03g119650.3 Solanum lycopersicum
Sopen03g038480 Solanum pennellii
Sp1g35950 Schrenkiella parvula
TAR629G2778 Trochodendron aralioides
THA.LOC104820400 Tarenaya hassleriana
Thecc.03G031600 Theobroma cacao
Thhalv10011186m.g Eutrema salsugineum
TPR.G32677 Trifolium pratense
TPR.G39113 Trifolium pratense
TPR.G39335 Trifolium pratense
TWI81G0419 Tripterygium wilfordii
unitig_8.g3057 Utricularia gibba
unitig_8.g3058 Utricularia gibba
vmacro04397 Vaccinium macrocarpon
VMungo0251G1242 Vigna mungo
VMungo0720G0265 Vigna mungo
Zm00001eb160220 Zea mays

User provided reference genes

Program Settings