Gene: Sopen03g038480

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen03g038480
  • Transcript Identifier Sopen03g038480.1
  • Gene Type Coding gene
  • Location Spenn-ch03 : 72777914-72800349 : positive

Gene Family Information

  • ID HOM05D003769
  • #Genes/#Species 183/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen03g038480.1

Descriptions

  • Description Encodes soluble protein containing N-terminal DENN domain and eight C-terminal WD-40 repeats. Involved in cytokinesis of guard mother cells and leaf epidermal cells. The overall growth and development of mutant plants is severely affected, they are smaller than wt, with defects in seedling development, leaf expansion and flower morphology which renders the mutant conditionally sterile. | STOMATAL CYTOKINESIS-DEFECTIVE 1 (SCD1) | INVOLVED IN: multidimensional cell growth, guard mother cell cytokinesis, cytokinesis by cell plate formation | LOCATED IN: CUL4 RING ubiquitin ligase complex | EXPRESSED IN: 26 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: WD40 repeat 2 , dDENN , WD40 repeat, conserved site , WD40 repeat , G-protein beta WD-40 repeat, region , uDENN , WD40 repeat-like-containing domain , DENN , WD40-repeat-containing domain , WD40/YVTN repeat-like-containing domain , WD40 repeat, subgroup | BEST Arabidopsis thaliana protein match is: pleiotropic regulatory locus 1 ., WD40/YVTN repeat-like-containing domain
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010052
ISO
PLAZA Integrative Orthologyguard cell differentiation AT1G49040
GO:0009825
ISO
PLAZA Integrative Orthologymultidimensional cell growth AT1G49040
GO:0000911
ISO
PLAZA Integrative Orthologycytokinesis by cell plate formation AT1G49040
GO:0045824
ISO
PLAZA Integrative Orthologynegative regulation of innate immune response AT1G49040
GO:0010235
ISO
PLAZA Integrative Orthologyguard mother cell cytokinesis AT1G49040

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030136
ISO
PLAZA Integrative Orthologyclathrin-coated vesicle AT1G49040
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT1G49040

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR005113 uDENN domain
IPR020472 G-protein beta WD-40 repeat
IPR005112 dDENN domain
IPR043153 DENN domain, C-terminal lobe
IPR001680 WD40 repeat
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
IPR001194 cDENN domain
IPR036322 WD40-repeat-containing domain superfamily
Mapman id Description
22.5.2.1.1 Vesicle trafficking.exocytic trafficking.exocytosis regulation.Exocyst-associated SCD complex.component SCD1